probpool: Create a Probpool object

In ChrKoenig/probpool: An implementation of probabilistic species pools

Description

Constructor function for class Probpool

Usage

probpool(env_pool = NULL, disp_pool = NULL, occurrences = NULL,
  interaction_matrix = NULL, interaction_method = 1)

Arguments

env_pool	A Raster* object containing environmental probabilities
disp_pool	A Raster* object containing dispersal probabilies
interaction_matrix	An interaction matrix
interaction_method	A number specifying the method used for incorporating species interacitons in the calculation of the probabilistic species pool. (see details)
occurences	A Raster* object containing occurrence data for individual species. Each species is represented by a binary RasterLayer, where cell values of 0 indicate absence and 1 indicates presence.

Details

[DETAILS GO HERE]

Value

An object of class Probpool

References

Karger, D. N. et al. (2016), Delineating probabilistic species pools in ecology and biogeography. Global Ecology and Biogeography, 25: 489-501. doi:10.1111/geb.12422

See Also

disppool, Probpool-class

Examples

example_probpool = probpool(env_pool = example1_env, disp_pool = example1_disp)

ChrKoenig/probpool documentation built on May 6, 2019, 7:23 a.m.