Man pages for Chris1221/coRge
An R package for the Examination of Multiple Correction Methodologies in Accurate Genomic Environments.
| analyze | Correction of Genomes in R |
| analyze_old | Correction of Genomes in R |
| assoc_wrapper | Gen Phen to Df in preparation for Lm |
| calculate_was | Takes gen file and calculates weighted allele scores (WAS) |
| causal.snps | Function for obtaining a vector of causal SNPs. |
| correct | Correct strata by group |
| fake.snps | Create a vector of fake non-sense SNPs |
| fdr | Calculates FDR given a data frame |
| gen2r | Oxford style genotype conversion |
| init | Initialize a testing environment |
| ld_cor | LD True Postiive Thresholding function |
| phen | Phenotype Calculation |
| rand | Random Number Generator |
| rand0 | Delta Generator Function |
| rebuild | Convenience function for recompilling Rcpp and reloading... |
| SE_mutate | Automated standard evaluation of mutate with in operator. |
| sim.gen | Haplotpe Simulation Function |
| stratify | Create strata |
| sub_job | Submission Convenience function |
