Files in Chris1221/pRs
Polgenic Risk Score Toolkit in R
.Rbuildignore
.buildignore
.gitignore
.gitmodules
DESCRIPTION
LICENSE
Makefile
NAMESPACE
R/AllClass.R
R/RcppExports.R
R/construct_score.R
R/estimate_o_seperately.R
R/estimate_o_together.R
R/make_comorbid_from_optimal.R
R/make_comorbid_prs.R
R/make_optimal_comorbid_prs.R
R/make_optimal_prs.R
R/make_prs.R
R/make_range_file.R
R/make_score_p.R
R/make_score_profile.R
R/replace_weights.R
R/test
README.md
TODO.md
inst/analysis/cad.R
inst/analysis/combine.R
inst/analysis/hdl.R
inst/analysis/ldl.R
inst/analysis/makefile
inst/analysis/optimal_comorbid/make_cmb.R
inst/analysis/optimal_comorbid/makefile
inst/analysis/optimal_comorbid/optimal_scores.R
inst/analysis/optimal_comorbid/optimal_scores.sh
inst/analysis/optimal_comorbid/replace_weights.R
inst/analysis/optimal_comorbid/sub.sh
inst/analysis/plink_analysis/Makefile
inst/analysis/plink_analysis/sub.sh
inst/analysis/tg.R
inst/bin/plink
inst/notes/initial_meeting.html
inst/notes/initial_meeting.md
inst/notes/sept2.html
inst/notes/sept2.md
inst/plink/.pversion
inst/plink/plink.log
inst/plink/toy.assoc
inst/plink/toy.bed
inst/plink/toy.bim
inst/plink/toy.fam
inst/plink/toy.log
inst/plink/toy.map
inst/plink/toy.ped
inst/plink/toy.raw
inst/proofs/makefile
inst/proofs/r2.aux
inst/proofs/r2.fdb_latexmk
inst/proofs/r2.fls
inst/proofs/r2.log
inst/proofs/r2.pdf
inst/proofs/r2.tex
inst/test_data/LICENSE
inst/test_data/plink
inst/test_data/plink-1.07-mac-intel.zip
inst/test_data/plink-1.07-mac-intel/COPYING.txt
inst/test_data/plink-1.07-mac-intel/README.txt
inst/test_data/plink-1.07-mac-intel/gPLINK.jar
inst/test_data/plink-1.07-mac-intel/plink
inst/test_data/plink-1.07-mac-intel/test.map
inst/test_data/plink-1.07-mac-intel/test.ped
inst/test_data/plink_mac.zip
inst/test_data/prettify
inst/test_data/test.bed
inst/test_data/test.bim
inst/test_data/test.fam
inst/test_data/test.log
inst/test_data/toy-temporary.fam
inst/test_data/toy.bed
inst/test_data/toy.bim
inst/test_data/toy.fam
inst/test_data/toy.log
inst/test_data/toy.map
inst/test_data/toy.ped
man/PRS-class.Rd
man/construct_score.Rd
man/estimate_o_seperately.Rd
man/estimate_o_together.Rd
man/make_comborbid_from_optimal.Rd
man/make_comorbid_from_optimal.Rd
man/make_optimal_comborbid_prs.Rd
man/make_optimal_prs.Rd
man/make_prs.Rd
man/make_range_file.Rd
man/make_score_p.Rd
man/make_score_profile.Rd
man/new_prs.Rd
man/oPRS-class.Rd
man/old_prs.Rd
man/plink2r.Rd
man/prs.Rd
man/replace_weights.Rd
src/Makevars
src/Makevars.win
src/RcppExports.cpp
src/new_prs.cpp
src/old_prs.cpp
src/plink2r.cpp
src/prs.cpp
src/split.cpp
