inst/analysis/optimal_comorbid/replace_weights.R
In Chris1221/pRs: Polgenic Risk Score Toolkit in R
library(pRs)
cad <- "~/cad.add.fixrand.dgc.anno.160614.out.txt"
hdl <- "/scratch/hpc2862/lshtm/aprs/summary_data/jointGwasMc_HDL.txt"
ldl <- "/scratch/hpc2862/lshtm/aprs/summary_data/jointGwasMc_LDL.txt"
tg <- "/scratch/hpc2862/lshtm/aprs/summary_data/jointGwasMc_TG.txt"
replace_weights(assoc1 = hdl,
assoc2 = cad,
file = "/home/hpc2862/repos/pRs/inst/analysis/optimal_comorbid/cad_weights_hdl.assoc")
replace_weights(assoc1 = ldl,
assoc2 = cad,
file = "/home/hpc2862/repos/pRs/inst/analysis/optimal_comorbid/cad_weights_ldl.assoc")
replace_weights(assoc1 = tg,
assoc2 = cad,
file = "/home/hpc2862/repos/pRs/inst/analysis/optimal_comorbid/cad_weights_tg.assoc")
Chris1221/pRs documentation built on May 6, 2019, 11:47 a.m.
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library(pRs)
cad <- "~/cad.add.fixrand.dgc.anno.160614.out.txt"
hdl <- "/scratch/hpc2862/lshtm/aprs/summary_data/jointGwasMc_HDL.txt"
ldl <- "/scratch/hpc2862/lshtm/aprs/summary_data/jointGwasMc_LDL.txt"
tg <- "/scratch/hpc2862/lshtm/aprs/summary_data/jointGwasMc_TG.txt"
replace_weights(assoc1 = hdl,
assoc2 = cad,
file = "/home/hpc2862/repos/pRs/inst/analysis/optimal_comorbid/cad_weights_hdl.assoc")
replace_weights(assoc1 = ldl,
assoc2 = cad,
file = "/home/hpc2862/repos/pRs/inst/analysis/optimal_comorbid/cad_weights_ldl.assoc")
replace_weights(assoc1 = tg,
assoc2 = cad,
file = "/home/hpc2862/repos/pRs/inst/analysis/optimal_comorbid/cad_weights_tg.assoc")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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