Files in ChrispinChaguza/RCandy
RCandy: an R package for rapid visualisation of homologous recombination events in bacterial genomes
.DS_Store
.Rbuildignore
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.gitignore
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
R/blank.plot.R
R/check.colour.R
R/count.recombinations.per.base.R
R/count.recombinations.per.genome.R
R/data.R
R/draw.genome.annotations.R
R/load.gubbins.GFF.R
R/load.phylogenetic.tree.R
R/load.ref.genome.GFF.R
R/load.taxon.metadata.R
R/phylo.rcandy.plot.R
RCandy.Rproj
RCandy_1.0.0.pdf
README.Rmd
README.md
cran-comments.md
data/RCandy.rda
inst/.DS_Store
inst/CITATION
inst/extdata/.DS_Store
inst/extdata/Hungary19A-6.gff
inst/extdata/ST320.final_tree.tre
inst/extdata/ST320.recombination_predictions.gff
inst/extdata/ST320.tsv
inst/vignette-supp/unnamed-chunk-10-1.png
inst/vignette-supp/unnamed-chunk-11-1.png
inst/vignette-supp/unnamed-chunk-12-1.png
inst/vignette-supp/unnamed-chunk-13-1.png
inst/vignette-supp/unnamed-chunk-14-1.png
inst/vignette-supp/unnamed-chunk-15-1.png
inst/vignette-supp/unnamed-chunk-16-1.png
inst/vignette-supp/unnamed-chunk-17-1.png
inst/vignette-supp/unnamed-chunk-18-1.png
inst/vignette-supp/unnamed-chunk-19-1.png
inst/vignette-supp/unnamed-chunk-20-1.png
inst/vignette-supp/unnamed-chunk-21-1.png
inst/vignette-supp/unnamed-chunk-22-1.png
inst/vignette-supp/unnamed-chunk-23-1.png
inst/vignette-supp/unnamed-chunk-24-1.png
inst/vignette-supp/unnamed-chunk-3-1.png
inst/vignette-supp/unnamed-chunk-4-1.png
inst/vignette-supp/unnamed-chunk-5-1.png
inst/vignette-supp/unnamed-chunk-6-1.png
inst/vignette-supp/unnamed-chunk-7-1.png
inst/vignette-supp/unnamed-chunk-8-1.png
inst/vignette-supp/unnamed-chunk-9-1.png
man/.DS_Store
man/RCandyVis.Rd
man/count.rec.events.per.base.Rd
man/count.rec.events.per.genome.Rd
man/is.color.Rd
man/load.genome.GFF.Rd
man/load.gubbins.GFF.Rd
man/load.taxon.metadata.Rd
man/quote-RCandy-quote.Rd
man/read.tree.file.Rd
man/show.blank.plot.Rd
man/show.genome.annotation.plot.Rd
vignettes/.gitignore
vignettes/Introduction.Rmd
