Files in Close-your-eyes/scexpr

Lots of helpers and wrappers to analyze scRNAseq data sets

LICENSE.md R/cds_dimred_to_seurat.R R/cds_trajectory_to_seurat.R R/cluster_correlation.R R/clustering_volcanos.R R/coalesce_join.R R/col_pal.R R/composition_barplot.R R/convert_gene_identifier.R R/feature_correlation.R R/feature_plot.R R/feature_plot_stat.R R/freq_pie_chart.R R/fsgea_on_msigdbr.R R/get_lum.R R/heatmap_pseudobulk.R R/hla_df_from_xml.R R/hla_typing.R R/hs_mm_ortholog_table.R R/prep_SO.R R/qc_diagnostics.R R/qc_params_meta_cols.R R/qc_plot.R R/reads_from_bam.R R/reverse_lognorm.R R/row_scale.R R/scale_min_max.R R/shiny_uis.R R/split_mat.R R/volcano_plot.R R/zzz.R inst/extdata/app.R man/cds_dimred_to_seurat.Rd man/cds_trajectory_to_seurat.Rd man/cluster_correlation.Rd man/clustering_volcanos.Rd man/coalesce_join.Rd man/col_pal.Rd man/composition_barplot.Rd man/convert_gene_identifier.Rd man/feature_correlation.Rd man/feature_plot.Rd man/feature_plot_stat.Rd man/fgsea_on_msigdbr.Rd man/freq_pie_chart.Rd man/heatmap_pseudobulk.Rd man/hla_df_from_xml.Rd man/hla_typing.Rd man/hs_mm_ortholog_table.Rd man/prep_SO.Rd man/qc_diagnostic.Rd man/qc_params_meta_cols.Rd man/qc_plot.Rd man/reads_from_bam.Rd man/reverse_lognorm.Rd man/row_scale.Rd man/scale_min_max.Rd man/shiny_uis.Rd man/split_mat.Rd man/volcano_plot.Rd