hs_mm_ortholog_table: Create an table of ortholog genes between human and mouse
In Close-your-eyes/scexpr: Lots of helpers and wrappers to analyze scRNAseq data sets
View source: R/hs_mm_ortholog_table.R
hs_mm_ortholog_table R Documentation
Create an table of ortholog genes between human and mouse
Description
A combined table with entries from ProjecTILs::Hs2Mm.convert.table and
entries from a bioMart query is generated. features_hs is used
to query bioMart. So, it is intended to look for mouse orthologs based
on human features.
Usage
hs_mm_ortholog_table(features_hs, features_mm)
Arguments
features_hs
vector of human genes (gene symbols, hgnc)
features_mm
vector of human genes (gene symbols)
Value
a list with (i) a table of orthologs and (ii, iii) vectors of genes which no orthologs were found for
Close-your-eyes/scexpr documentation built on April 21, 2023, 10:27 a.m.
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View source: R/hs_mm_ortholog_table.R
| hs_mm_ortholog_table | R Documentation |
Create an table of ortholog genes between human and mouse
Description
A combined table with entries from ProjecTILs::Hs2Mm.convert.table and entries from a bioMart query is generated. features_hs is used to query bioMart. So, it is intended to look for mouse orthologs based on human features.
Usage
hs_mm_ortholog_table(features_hs, features_mm)
Arguments
features_hs |
vector of human genes (gene symbols, hgnc) |
features_mm |
vector of human genes (gene symbols) |
Value
a list with (i) a table of orthologs and (ii, iii) vectors of genes which no orthologs were found for
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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