NEWS.md

In CmlMagneville/mFD: Compute and Illustrate the Multiple Facets of Functional Diversity

mFD (development version)

• Include new functions to deal with FEs:
• from.spfe.to.feasb() which computes the assemblages × FEs dataframe with outputs of the mFD::sp.to.fe() function
• fe.sp.df.computation() which creates a dataframe linking FEs names to species names with outputs of the mFD::sp.to.fe() function
• search.sp.nm() which finds a species name given an FE name
• from.fecoord.to.spcoord() function which converts the dataframe of FEs coordinates to one with species coordinates.
• Update the website with a FAQ based on user's questions

mFD 1.0.7

• Traits names in the tr_cat dataframe must be the same that in the sp_tr dataframe: otherwise can lead to bugs if using weights: check.sp.tr()
• Add a sentence explaining that in the General Workflow vignette

mFD 1.0.6

• Fix bug:
• Correct the sp.plot() fct when plotting one asb (pb with vertices aes)
• Correct the sp.plot() fct when several sp same place but only one as vert

mFD 1.0.5

• Fix bug:
• Correct funct.dist() function error when only quantitative traits (ISSUE 34)
• Remove FSGE and FUGE from fuse() outputs

mFD 1.0.4

• Add warning messages in funct.dist function: when using only continuous traits, no weighting is realised for now.
• Add informations in the General Tutorial and in the Continuous Traits, no weighting is realised for now.
• Fix bug:
• when computing FRic and FDiv but not enough species at different coordinates in the functional space to compute the convex-hull. Before it stopped with the error "Error in fdiv.computation(): Names of the vertices are not all present in species coordinates matrix. Please check." as FRic vert were NA. Now FRic vert are NULL and pas the check.
• when computing FEs with fuzzy traits, attribution of species to wrong FEs, so when computing FEs, creating as many FEs as species.

mFD 1.0.3

• Fix bug:
• scale center traits (parenthesis missing) in tr.cont.scale function
• correct FDiv legend in plot
• correct typo in Functional entities vignette

mFD 1.0.2

• New vignette: create customised plots
• Review mFD general workflow: fixed typos and missing chunks
• Fix minor bugs in some functions:
• correct beta functional axes names, beta.multidim.plot() function
• correct check fuzzy names, check.fuzzy() function
• Review function documentation
• Add paper citation to the READ.ME file

mFD 1.0.1

• Fix bug with fdist_scaling = TRUE in quality.fspaces function (Issue #19)

mFD 1.0.0

• First release of the package.
• Submission to CRAN

CmlMagneville/mFD documentation built on Dec. 21, 2024, 7:36 p.m.