NormalyzerResults: Representation of the results from performing normalization...
In ComputationalProteomics/NormalyzerDE: Evaluation of normalization methods and calculation of differential expression analysis statistics
View source: R/NormalyzerResults.R
NormalyzerResults R Documentation
Representation of the results from performing normalization over a dataset
Description
It is linked to a NormalyzerDataset instance representing the raw data
which has been processed. After performing evaluation it also links to
an instance of NormalyzerEvaluationResults representing the results
from the evaluation.
Usage
NormalyzerResults(nds)
NormalyzerResults(nds)
Arguments
nds
NormalyzerDataset object
Value
nr Prepared NormalyzerResults object
Slots
normalizationsSummarizedExperiment object containing calculated
normalization results
ndsNormalyzer dataset representing run data
nerNormalyzer evaluation results
for running extended normalizations
Examples
data(example_summarized_experiment)
normObj <- getVerifiedNormalyzerObject("job_name", example_summarized_experiment)
emptyNormResults <- NormalyzerResults(normObj)
ComputationalProteomics/NormalyzerDE documentation built on Sept. 18, 2023, 9:15 p.m.
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View source: R/NormalyzerResults.R
| NormalyzerResults | R Documentation |
Representation of the results from performing normalization over a dataset
Description
It is linked to a NormalyzerDataset instance representing the raw data which has been processed. After performing evaluation it also links to an instance of NormalyzerEvaluationResults representing the results from the evaluation.
Usage
NormalyzerResults(nds)
NormalyzerResults(nds)
Arguments
nds |
NormalyzerDataset object |
Value
nr Prepared NormalyzerResults object
Slots
normalizationsSummarizedExperiment object containing calculated normalization results
ndsNormalyzer dataset representing run data
nerNormalyzer evaluation results for running extended normalizations
Examples
data(example_summarized_experiment)
normObj <- getVerifiedNormalyzerObject("job_name", example_summarized_experiment)
emptyNormResults <- NormalyzerResults(normObj)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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