Files in ComputationalProteomics/OmicLoupe
OmicLoupe: Taking a closer look at omics
.gitignore
DESCRIPTION
Dockerfile
LICENSE
NAMESPACE
NEWS
R/MapObject.R
R/Venn.R
R/app.R
R/help_texts.R
R/launch_app.R
R/module_correlation.R
R/module_help.R
R/module_ideas.R
R/module_overlap.R
R/module_pca.R
R/module_quality.R
R/module_setup.R
R/module_spotcheck.R
R/module_statdist.R
R/pca.R
R/quality_plots.R
R/reactive_values.R
R/setup_server_utils.R
R/setup_ui_utils.R
R/shared_visualization_setup.R
R/upset_presence_utility_functions.R
R/upset_utility_functions.R
R/vis_server_plots.R
R/vis_server_utils.R
README.md
data/example_data/README
data/example_data/design.tsv
data/example_data/dia_umpire_data.tsv
data/example_data/openswath_data.tsv
data/test_data/data1.tsv
data/test_data/data1_incomplete.tsv
data/test_data/data2.tsv
data/test_data/design.tsv
dev/source_and_run.R
doc/PCA_screen.png
doc/code_schematics.graphml
doc/data_help.png
doc/design_help.png
doc/plotly_screen1.png
doc/plotly_screen2.png
doc/publishing_omicloupe
doc/report_template_corr.Rmd
doc/report_template_overlap.Rmd
doc/report_template_pca.Rmd
doc/report_template_quality.Rmd
doc/report_template_spotcheck.Rmd
doc/report_template_statdist.Rmd
doc/setup_screen.png
inst/extdata/PCA_screen.png
inst/extdata/data_help.png
inst/extdata/design_help.png
inst/extdata/plotly_screen1.png
inst/extdata/plotly_screen2.png
inst/extdata/report_template_corr.Rmd
inst/extdata/report_template_overlap.Rmd
inst/extdata/report_template_pca.Rmd
inst/extdata/report_template_quality.Rmd
inst/extdata/report_template_spotcheck.Rmd
inst/extdata/report_template_statdist.Rmd
inst/extdata/setup_screen.png
man/figures/overview_visualization.png
man/module_setup_server.Rd
man/runApp.Rd
man/setup_panel_ui.Rd
