modifications: Modifications data set.
In ComputationalProteomicsUnit/unimod: Managing amino acid modifications for mass spectrometry
modifications R Documentation
Modifications data set.
Description
'data.frame' of modifications from the unimod database.
Usage
modifications
Format
A 'data.frame' with 15 columns (Id (created by
Name:(Position-)Site(:NeutralLoss) because unimod id is not unique),
UnimodId, Name, Description, AvgMass, MonoMass, Site, Position,
Classification, SpecGroup, NeutralLoss, LastModification, Approved,
Hidden) for the modifications.
Details
It was created as
follows:
“'
unimod:::.createDataSets()
“'
Source
Taken from the unimod database: http://www.unimod.org/xml/unimod.xml.
Examples
data(modifications)
head(modifications)
ComputationalProteomicsUnit/unimod documentation built on Feb. 12, 2023, 2:57 a.m.
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| modifications | R Documentation |
Modifications data set.
Description
'data.frame' of modifications from the unimod database.
Usage
modifications
Format
A 'data.frame' with 15 columns (Id (created by Name:(Position-)Site(:NeutralLoss) because unimod id is not unique), UnimodId, Name, Description, AvgMass, MonoMass, Site, Position, Classification, SpecGroup, NeutralLoss, LastModification, Approved, Hidden) for the modifications.
Details
It was created as follows:
“' unimod:::.createDataSets() “'
Source
Taken from the unimod database: http://www.unimod.org/xml/unimod.xml.
Examples
data(modifications) head(modifications)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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