Files in ConesaLab/MirCure
A tool for quality control, filter, and curation of microRNAs of animals and plants
.Rbuildignore
.gitignore
Article_scripts/drawROC_miRBase.R
Article_scripts/drawROC_mirDeep.R
Article_scripts/resultAnalysis.R
Auxiliary_scripts/PrepareMirbase/README.md
Auxiliary_scripts/PrepareMirbase/server.R
Auxiliary_scripts/PrepareMirbase/ui.R
Auxiliary_scripts/mirDeep_2_mirCure.R
DESCRIPTION
Figures/Fig_2A.png
Figures/Figure 4.png
Figures/Figure1_MirCure_Pipeline_Final.jpg
Figures/Figure3_final.png
Figures/Figure4_miRBase.jpeg
Figures/Figure4_miRDeep.jpeg
Figures/Picture 2.png
Figures/ReadMe.md
Figures/mircure_url.png
How to create bam files.md
LICENSE
MirCureApp.Rproj
NAMESPACE
R/Functions.R
README.md
inst/ViennaRNA/Install-ViennaRNA-2.4.11_64bit.exe
inst/ViennaRNA/ViennaRNA-2.4.11.tar.gz
inst/shinyAPPs/MirCure/Makereport.Rmd
inst/shinyAPPs/MirCure/data/database/Mirbase_mature.fa
inst/shinyAPPs/MirCure/data/genomes/put_genome_file_in_this_folder.md
inst/shinyAPPs/MirCure/data/organisms.txt
inst/shinyAPPs/MirCure/reports/ReadMe.txt
inst/shinyAPPs/MirCure/server.R
inst/shinyAPPs/MirCure/ui.R
inst/shinyAPPs/MirCure/www/appfigs/Bge-Mir-1_pre.png
inst/shinyAPPs/MirCure/www/appfigs/Bge-Mir-1_pre_fold.jpg
inst/shinyAPPs/MirCure/www/appfigs/adjust_annotation.png
inst/shinyAPPs/MirCure/www/appfigs/alignments.png
inst/shinyAPPs/MirCure/www/images/ReadMe
inst/shinyAPPs/MirCure/www/organisms.txt
inst/shinyAPPs/MirCure/www/plots/ReadMe.txt
man/hello.Rd
man/runExample.Rd
man/runMirCure.Rd
