.Rbuildignore
.gitignore
CODE_OF_CONDUCT.md
CONTRIBUTING.md
DESCRIPTION
LICENSE.md
NAMESPACE
NEWS.md
R/abundance-palette.R
R/access-key.R
R/data.R
R/download.R
R/ebirdst-extent.R
R/ebirdst-habitat.R
R/ebirdst-package.R
R/ebirdst-ppms.R
R/ebirdst-subset.R
R/load.R
R/plot.R
R/sample.R
R/stixelize.R
R/sysdata.rda
R/utils-pipe.R
R/utils.R
R/zzz.R
README.Rmd
README.md
_pkgdown.yml
codecov.yml
cran-comments.md
data-raw/config.json
data-raw/ebirdst-predictors.R
data-raw/ebirdst-runs.R
data-raw/ebirdst-weeks.R
data-raw/example-data.R
data-raw/habitat-colors.csv
data-raw/internal-data.R
data-raw/seasons.csv
data-raw/species-list.txt
data-raw/weather-variables.csv
data/ebirdst_predictors.rda
data/ebirdst_runs.rda
data/ebirdst_weeks.rda
docs/404.html
docs/CODE_OF_CONDUCT.html
docs/CONTRIBUTING.html
docs/LICENSE.html
docs/articles/ebirdst.html
docs/articles/index.html
docs/articles/product-changelog.html
docs/articles/rasters.html
docs/articles/rasters_files/figure-html/map_basemap-1.png
docs/articles/rasters_files/figure-html/map_bins-1.png
docs/articles/rasters_files/figure-html/map_extent-1.png
docs/articles/rasters_files/figure-html/map_projection-1.png
docs/articles/rasters_files/figure-html/map_simple-1.png
docs/articles/rasters_files/figure-html/stats_pop-1.png
docs/articles/rasters_files/figure-html/trajectories_extract-1.png
docs/authors.html
docs/bootstrap-toc.css
docs/bootstrap-toc.js
docs/docsearch.css
docs/docsearch.js
docs/index.html
docs/link.svg
docs/news/index.html
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/Rplot001.png
docs/reference/abundance_palette.html
docs/reference/bernoulli_dev.html
docs/reference/binom_test_p.html
docs/reference/convert_classes.html
docs/reference/date_to_st_week.html
docs/reference/ebirdst.html
docs/reference/ebirdst_data_dir.html
docs/reference/ebirdst_download.html
docs/reference/ebirdst_extent.html
docs/reference/ebirdst_habitat.html
docs/reference/ebirdst_ppms.html
docs/reference/ebirdst_ppms_ts.html
docs/reference/ebirdst_predictors.html
docs/reference/ebirdst_runs.html
docs/reference/ebirdst_sample.html
docs/reference/ebirdst_subset.html
docs/reference/ebirdst_version.html
docs/reference/ebirdst_weeks.html
docs/reference/figures/README-quick_start-1.png
docs/reference/get_species.html
docs/reference/get_species_path.html
docs/reference/index.html
docs/reference/label_raster_stack.html
docs/reference/load_config.html
docs/reference/load_fac_map_parameters.html
docs/reference/load_pds.html
docs/reference/load_pis.html
docs/reference/load_predictions.html
docs/reference/load_ranges.html
docs/reference/load_raster.html
docs/reference/load_stixels.html
docs/reference/parse_raster_dates.html
docs/reference/pipe.html
docs/reference/plot_pds.html
docs/reference/plot_pis.html
docs/reference/poisson_dev.html
docs/reference/project_extent.html
docs/reference/set_ebirdst_access_key.html
docs/reference/stixelize.html
docs/sitemap.xml
ebirdst-citation.bib
ebirdst.Rproj
example-data/2020/yebsap-example/config.json
example-data/2020/yebsap-example/predictions.db
example-data/2020/yebsap-example/ranges/yebsap-example_range_raw_lr_2020.gpkg
example-data/2020/yebsap-example/ranges/yebsap-example_range_smooth_lr_2020.gpkg
example-data/2020/yebsap-example/seasonal/band-seasons.csv
example-data/2020/yebsap-example/seasonal/yebsap-example_abundance_full-year_max_lr_2020.tif
example-data/2020/yebsap-example/seasonal/yebsap-example_abundance_full-year_mean_lr_2020.tif
example-data/2020/yebsap-example/seasonal/yebsap-example_abundance_seasonal_max_lr_2020.tif
example-data/2020/yebsap-example/seasonal/yebsap-example_abundance_seasonal_mean_lr_2020.tif
example-data/2020/yebsap-example/seasonal/yebsap-example_count_full-year_max_lr_2020.tif
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example-data/2020/yebsap-example/seasonal/yebsap-example_occurrence_seasonal_mean_lr_2020.tif
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example-data/2020/yebsap-example/seasonal/yebsap-example_percent-population_full-year_mean_lr_2020.tif
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example-data/2020/yebsap-example/stixel_summary.db
example-data/2020/yebsap-example/weekly/band-dates.csv
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example-data/2020/yebsap-example/weekly/yebsap-example_abundance_upper_lr_2020.tif
example-data/2020/yebsap-example/weekly/yebsap-example_centroids.csv
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example-data/2020/yebsap-example/weekly/yebsap-example_percent-population_median_lr_2020.tif
example-data/yebsap-ERD2019-STATUS-20200930-8d36d265-example/abundance_seasonal/yebsap-ERD2019-STATUS-20200930-8d36d265-example_hr_2019_abundance-seasonal_breeding.tif
example-data/yebsap-ERD2019-STATUS-20200930-8d36d265-example/abundance_seasonal/yebsap-ERD2019-STATUS-20200930-8d36d265-example_hr_2019_abundance-seasonal_nonbreeding.tif
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example-data/yebsap-ERD2019-STATUS-20200930-8d36d265-example/abundance_seasonal/yebsap-ERD2019-STATUS-20200930-8d36d265-example_hr_2019_abundance-seasonal_prebreeding_migration.tif
example-data/yebsap-ERD2019-STATUS-20200930-8d36d265-example/abundance_seasonal/yebsap-ERD2019-STATUS-20200930-8d36d265-example_lr_2019_abundance-seasonal_breeding.tif
example-data/yebsap-ERD2019-STATUS-20200930-8d36d265-example/abundance_seasonal/yebsap-ERD2019-STATUS-20200930-8d36d265-example_lr_2019_abundance-seasonal_nonbreeding.tif
example-data/yebsap-ERD2019-STATUS-20200930-8d36d265-example/abundance_seasonal/yebsap-ERD2019-STATUS-20200930-8d36d265-example_lr_2019_abundance-seasonal_postbreeding_migration.tif
example-data/yebsap-ERD2019-STATUS-20200930-8d36d265-example/abundance_seasonal/yebsap-ERD2019-STATUS-20200930-8d36d265-example_lr_2019_abundance-seasonal_prebreeding_migration.tif
example-data/yebsap-ERD2019-STATUS-20200930-8d36d265-example/abundance_seasonal/yebsap-ERD2019-STATUS-20200930-8d36d265-example_mr_2019_abundance-seasonal_breeding.tif
example-data/yebsap-ERD2019-STATUS-20200930-8d36d265-example/abundance_seasonal/yebsap-ERD2019-STATUS-20200930-8d36d265-example_mr_2019_abundance-seasonal_nonbreeding.tif
example-data/yebsap-ERD2019-STATUS-20200930-8d36d265-example/abundance_seasonal/yebsap-ERD2019-STATUS-20200930-8d36d265-example_mr_2019_abundance-seasonal_postbreeding_migration.tif
example-data/yebsap-ERD2019-STATUS-20200930-8d36d265-example/abundance_seasonal/yebsap-ERD2019-STATUS-20200930-8d36d265-example_mr_2019_abundance-seasonal_prebreeding_migration.tif
example-data/yebsap-ERD2019-STATUS-20200930-8d36d265-example/config.rds
example-data/yebsap-ERD2019-STATUS-20200930-8d36d265-example/pi-pd.db.zip
example-data/yebsap-ERD2019-STATUS-20200930-8d36d265-example/predictions.db.zip
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example-data/yebsap-ERD2019-STATUS-20200930-8d36d265-example/weekly_cubes/yebsap-ERD2019-STATUS-20200930-8d36d265-example_hr_2019_abundance_lower.tif
example-data/yebsap-ERD2019-STATUS-20200930-8d36d265-example/weekly_cubes/yebsap-ERD2019-STATUS-20200930-8d36d265-example_hr_2019_abundance_median.tif
example-data/yebsap-ERD2019-STATUS-20200930-8d36d265-example/weekly_cubes/yebsap-ERD2019-STATUS-20200930-8d36d265-example_hr_2019_abundance_upper.tif
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example-data/yebsap-ERD2019-STATUS-20200930-8d36d265-example/weekly_cubes/yebsap-ERD2019-STATUS-20200930-8d36d265-example_lr_2019_abundance_lower.tif
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inst/CITATION
inst/extdata/example-data_file-list.txt
makefile.R
man/abundance_palette.Rd
man/bernoulli_dev.Rd
man/binom_test_p.Rd
man/convert_classes.Rd
man/date_to_st_week.Rd
man/ebirdst.Rd
man/ebirdst_data_dir.Rd
man/ebirdst_download.Rd
man/ebirdst_extent.Rd
man/ebirdst_habitat.Rd
man/ebirdst_ppms.Rd
man/ebirdst_ppms_ts.Rd
man/ebirdst_predictors.Rd
man/ebirdst_runs.Rd
man/ebirdst_sample.Rd
man/ebirdst_subset.Rd
man/ebirdst_version.Rd
man/ebirdst_weeks.Rd
man/figures/README-quick_start-1.png
man/get_species.Rd
man/get_species_path.Rd
man/label_raster_stack.Rd
man/load_config.Rd
man/load_fac_map_parameters.Rd
man/load_pds.Rd
man/load_pis.Rd
man/load_predictions.Rd
man/load_ranges.Rd
man/load_raster.Rd
man/load_stixels.Rd
man/parse_raster_dates.Rd
man/pipe.Rd
man/plot_pds.Rd
man/plot_pis.Rd
man/poisson_dev.Rd
man/project_extent.Rd
man/set_ebirdst_access_key.Rd
man/stixelize.Rd
tests/testthat.R
tests/testthat/setup.R
tests/testthat/test_download.R
tests/testthat/test_extent.R
tests/testthat/test_habitat.R
tests/testthat/test_loading.R
tests/testthat/test_palette.R
tests/testthat/test_pipd.R
tests/testthat/test_ppms.R
tests/testthat/test_ranges.R
tests/testthat/test_rasters.R
tests/testthat/test_stixels.R
vignettes/.gitignore
vignettes/ebirdst.Rmd
vignettes/product-changelog.Rmd
vignettes/rasters.Rmd