NEWS.md

In CostelloLab/BRSpred: BCG Response Subtype Predictor for High-Risk Non-Muscle Invasive Bladder Cancer

BRSpred Version 1.2.1 2024-08-13

• Corrections to erasmus_clinical (data provided with the package)

BRSpred Version 1.2.0 2023-05-12

• Addition of raw aligned count data matrices for Cohorts A and B (Data S2 in paper)

BRSpred Version 1.1.2 2023-03-15

• Compression of data/-folder contents (.RData)
• Minor adjustments to 'BRS prediction' vignette

BRSpred Version 1.1.1 2023-03-14

• Clarifications and reformatting in the 'BRS prediction' vignette

BRSpred Version 1.1.0 2023-02-15

• BRS main function revised
• Replaced dot '.' with underscore '_' in all data objects
• Added post-BCG data for cohort A
• Instead of providing a pre-fit pamr, the pamr object is fit in BRS function on the fly as per pipeline
• Fixes to R CMD check NOTEs (LazyDataCompression etc)

BRSpred Version 1.0.5 2022-08-24

• Minor revisions

BRSpred Version 1.0.4 2022-08-09

• Reordering of clinical data, with Grade and Substage earlier

BRSpred Version 1.0.3 2022-04-03

• Sup Table 5 (immune cell estimates) added to the package
• Revised imports

BRSpred Version 1.0.2 2022-04-03

• Grade and substage added to clinical data

BRSpred Version 1.0.1 2021-11-24

• Minor tidying up, mention of build_vignettes and Rtools

BRSpred Version 1.0.0 2021-11-11

• First version of BRSpred

CostelloLab/BRSpred documentation built on Aug. 14, 2024, 9:17 a.m.