API for CreRecombinase/FGEM
R package for Functional Genomics using Expectation Maximization (FGEM)
| Global functions | |
|---|---|
| %>% | Man page |
| %||% | Man page |
| BF2posterior | Man page Source code |
| FGEM_Logit_log_lik | Source code |
| R_Log1_Exp | Source code |
| coeff_mat | Source code |
| create_X | Source code |
| cv_fgem | Man page Source code |
| cv_relax_fgem | Man page Source code |
| df2sparse | Source code |
| empty_x | Source code |
| fgem | Man page Man page Source code |
| fgem-package | Man page |
| fgem_bfgs | Man page Source code |
| fgem_elasticnet | Source code |
| fgem_grad | Man page Source code |
| fgem_grad.default | Man page Source code |
| fgem_grad.dgCMatrix | Man page Source code |
| fgem_grad.matrix | Man page Source code |
| fgem_grad_stan | Man page Source code |
| fgem_hess | Man page Source code |
| fgem_hess.default | Source code |
| fgem_hess.dgCMatrix | Source code |
| fgem_hess.matrix | Source code |
| fgem_hess_stan | Man page Source code |
| fgem_lik | Man page Source code |
| fgem_lik.default | Man page Source code |
| fgem_lik.dgCMatrix | Man page Source code |
| fgem_lik.matrix | Man page Source code |
| fgem_lik_stan | Source code |
| fgem_marginal | Man page Source code |
| fgem_null | Source code |
| fgem_null_fit | Source code |
| fgem_null_lik | Source code |
| gen_p | Source code |
| gen_posterior | Man page Source code |
| gen_prior | Man page Source code |
| gen_u | Source code |
| join_long_wide | Source code |
| l1_norm_penalty | Source code |
| l2_norm_penalty | Source code |
| last_completed | Source code |
| log1mexp | Man page Source code Source code |
| log1pexp | Man page Source code |
| log_1p_exp | Source code |
| log_BF2_logpost | Source code |
| log_FGEM_log_lik | Source code |
| log_log_u | Source code |
| log_pbernoulli | Man page Source code |
| logsum | Source code |
| lseq | Man page Source code |
| make_env_obj | Source code |
| max_lambda | Source code |
| num_resolved | Source code |
| partial_resolve | Man page Source code |
| predict_fgem | Man page Source code |
| predict_long_df | Source code |
| predict_null_fgem | Source code |
| predict_uniform_prior | Source code |
| prep_fgem | Source code |
| prior_mean | Source code |
| pull_beta | Source code |
| resolved_or_null | Man page Source code |
| retrieve_resolved | Man page Source code |
| sample_model_sd | Source code |
| sp_fgem_grad_stan | Man page Source code |
| sp_fgem_hess_stan | Man page Source code |
| sp_fgem_lik_stan | Man page Source code |
| subset_long | Source code |
| summ_beta | Source code |
| summarise_cv_lik | Source code |
| trip2sparseMatrix | Man page Source code |
| value_wrapper | Source code |
| wait_on_n | Man page Source code |
