In CyrilLagger/scAgeComShiny: A Shiny App for scAgeCom

knitr::opts_chunk$set(
  collapse = TRUE,
  comment = "#>",
  fig.path = "man/figures/README-",
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scAgeComShiny

scAgeComShiny provides a shiny app to explore how intercellular communication changes with age in 23 mouse tissues.

An online version of this app can be accessed here: scagecom.org.

A docker image of the app is available here.

Installation

You can run a local version of the website locally as follows.

• Git clone this repo locally
• Launch R and install the package

if(!require(devtools)) install.packages("devtools")
devtools::install_github("CyrilLagger/scAgeComShiny")

• Download the associated data available at figshare and save the file scAgeCom_data.rda under scAgeComShiny/data/
• Run

pkgload::load_all(export_all = FALSE, helpers = FALSE, attach_testthat = FALSE)
options("golem.app.prod" = TRUE)
scAgeComShiny::run_app()

Reference

This shiny app has been built with golem.

CyrilLagger/scAgeComShiny documentation built on April 14, 2025, 8:34 a.m.