README.md

In DEQrmichie/odeqcdr: ODEQ Continuous Data Review

odeqcdr

ODEQ Continuous Data Review

A R package that provides QA/QC support for review of continuous data entered into the Oregon Department of Environmental Quality's continuous water quality data templates.

Install

library(remotes)

remotes::install_github(repo = 'OR-Dept-Environmental-Quality/odeqcdr', 
                        host = 'https://api.github.com', 
                        dependencies= TRUE, force = TRUE, upgrade='never')

# Suggest installing odeqmloctools for location review
remotes::install_github(repo = 'OR-Dept-Environmental-Quality/odeqmloctools', 
                        host = 'https://api.github.com', 
                        dependencies= TRUE, force = TRUE, upgrade='never')

General Workflow

This outlines the general workflow using the odeqcdr functions. Not all steps are included.

See example.R for a specific example.

library(odeqmloctools)

#- Import the xlsx template -
odeqcdr::contin_import()

#- Set Project ID -

#- Completeness Pre checks -
odeqcdr::pre_checks()

#- Monitoring location review -
odeqmloctools::launch_map()

#- Datetime Checks -

# timezone check

# Daylight savings check
odeqcdr::dst_check()

# Make a datetime
odeqcdr::dt_combine()

# Apply datetime corrections
odeqcdr::dt_parts()

#- Unit Conversion -

#- DQL grading -

odeqcdr::dql_accuracy()

odeqcdr::dql_precision()

# Final DQL

# Flag potential anomalies
odeqcdr::anomaly_check()

# Launch Shiny app for further review
odeqcdr::launch_shiny()

#- Make DQL and Result Status edits -

#- Generate Summary Stats -
odeqcdr::sumstats()

#- Export back to xlsx -
odeqcdr::contin_export()

DEQrmichie/odeqcdr documentation built on Feb. 15, 2025, 10:01 a.m.