Human_Cho_Expr: Gene Expression data from selected samples of the Human CHO...
In DGendoo/MM2S: Single-Sample Classifier of Medulloblastoma Subtypes for Medulloblastoma Patient Samples, Mouse Models, and Cell Lines
Description
Usage
Format
Source
References
Examples
Description
Gene Expression data (formatted and normalized using BrainArray CDFs) for 10 selected samples of the CHO dataset (see references for details).
Usage
1
Format
A data frame with 12129 observations on the following 10 variables.
MD_269WNT sample
MD_172WNT sample
NC_1Normal Cerebellum
NC_3Normal Cerebellum
MD_151SHH sample
MD_153SHH sample
MD_268Group4 sample
MD_161Group4 sample
MD_242Group3 sample
MD_75Group3 sample
Source
CHO dataset: Y.J. Cho, A. Tsherniak, P. Tamayo, S. Santagata, A. Ligon, H. Greulich, R. Berhoukim, V. Amani, L. Goumnerova, C.G. Eberhart, C.C. Lau, J.M. Olson, R.J. Gilbertson, A. Gajjar, O. Delattre, M. Kool, K. Ligon, M. Meyerson, J.P. Mesirov, S.L. Pomeroy, Integrative genomic analysis of medulloblastoma identifies a molecular subgroup that drives poor clinical outcome, J Clin Oncol, 29 (2011) 1424-1430.
References
Gendoo, D. M., Smirnov, P., Lupien, M. & Haibe-Kains, B. Personalized diagnosis of medulloblastoma subtypes across patients and model systems.
Genomics, doi:10.1016/j.ygeno.2015.05.002 (2015)
Manuscript URL: http://www.sciencedirect.com/science/article/pii/S0888754315000774
Examples
1
DGendoo/MM2S documentation built on May 6, 2019, 1:16 p.m.
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Description Usage Format Source References Examples
Description
Gene Expression data (formatted and normalized using BrainArray CDFs) for 10 selected samples of the CHO dataset (see references for details).
Usage
1 |
Format
A data frame with 12129 observations on the following 10 variables.
MD_269WNT sample
MD_172WNT sample
NC_1Normal Cerebellum
NC_3Normal Cerebellum
MD_151SHH sample
MD_153SHH sample
MD_268Group4 sample
MD_161Group4 sample
MD_242Group3 sample
MD_75Group3 sample
Source
CHO dataset: Y.J. Cho, A. Tsherniak, P. Tamayo, S. Santagata, A. Ligon, H. Greulich, R. Berhoukim, V. Amani, L. Goumnerova, C.G. Eberhart, C.C. Lau, J.M. Olson, R.J. Gilbertson, A. Gajjar, O. Delattre, M. Kool, K. Ligon, M. Meyerson, J.P. Mesirov, S.L. Pomeroy, Integrative genomic analysis of medulloblastoma identifies a molecular subgroup that drives poor clinical outcome, J Clin Oncol, 29 (2011) 1424-1430.
References
Gendoo, D. M., Smirnov, P., Lupien, M. & Haibe-Kains, B. Personalized diagnosis of medulloblastoma subtypes across patients and model systems. Genomics, doi:10.1016/j.ygeno.2015.05.002 (2015)
Manuscript URL: http://www.sciencedirect.com/science/article/pii/S0888754315000774
Examples
1 |
R Package Documentation
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We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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