Man pages for DJFernandes/ezHCA

condMICalculate conditional mutual information
day_breakFind day break
downsample_functiondownsample HCA timeseries
find_start_timeFind start time for HCA file
HCAdf_to_activityHome cage activity summary
HCAdf_to_entropyHome cage entropy summary
HCAdf_to_MIMutual Information summary
HCAdf_to_TETransfer entropy summary
hcaReadHDF5Read a HCA HDF5 file using rhdf5
hcaReadHDF5seriesRead many HCA HDF5 files
hcaSystemReadHDF5Read an HCA HDF5 file and return a list of dataframes, one...
hcaSystemReadHDF5_defense_funcdefence for hcaSystemReadHDF5 inputs
hcaSystemReadHDF5_subj_defense_funcdefence for hcaSystemReadHDF5 subjects
hca_to_dist_dfObtain distance and speed
hca_to_hcadfConvert HCA object to HCA dataframe
homeCageEntropyCalculate home cage entropy
ModeFind mode
no_message_h5lssuppress console messages from rhdf5::h5ls
plot.HCAPlot HCA
plot.HCAentropyPlot HCA entropy
plot.HCAmiPlot HCA MI
readsubjfuncSubjects in HDF5 files
TransEntCalculate transfer entropy
tvec_to_dayvecAnnotate time with day or night
DJFernandes/ezHCA documentation built on June 12, 2025, 12:01 p.m.