Files in DPP4ResearchGroup/SyntenyViz
Visualize the synteny of a gene structure across species
.Rbuildignore
.gitattributes
.github/workflows/draft-pdf.yml
.gitignore
.hound.yml
.scripts/Jekyll_deploy.sh
.scripts/R_build.sh
.scripts/R_debug.sh
.scripts/R_doc.sh
.scripts/R_publish_framework.sh
.travis.yml
DESCRIPTION
LICENSE
NAMESPACE
R/SynVizOrgms-data.R
R/SyntenyViz-package.R
R/coordFormat.R
R/geneSubset.R
R/geneSubsetTestResult-data.R
R/getDB.R
R/orgmOrgDB-data.R
R/orgmTxDB-data.R
R/orgmsCollection.R
R/orgmsCollectionTestResult-data.R
R/synvizDataTest-data.R
R/synvizPlot.R
README.md
data-raw/DATASET.R
data-raw/SynVizOrgms.R
data-raw/SynVizOrgms.csv
data-raw/orgDBTable.csv
data-raw/orgOrgDBTable.R
data-raw/orgOrgDBTable.csv
data-raw/orgTxDBTable.R
data-raw/orgmTable.R
data-raw/orgmTxDBTable.csv
data/SynVizOrgms.rda
data/geneSubsetTestResult.rda
data/orgmOrgDB.rda
data/orgmTxDB.RData
data/orgmTxDB.rda
data/orgmsCollectionTestResult.rda
data/synvizDataTest.rda
doc/SyntenyViz_workflow.R
doc/SyntenyViz_workflow.Rmd
doc/SyntenyViz_workflow.html
doc/SyntenyViz_workflow.pdf
jekyll_collection/SyntenyViz_workflow.R
jekyll_collection/SyntenyViz_workflow.Rmd
jekyll_collection/SyntenyViz_workflow.html
jekyll_collection/SyntenyViz_workflow.pdf
man/SynVizOrgms.Rd
man/SyntenyViz.Rd
man/coordFormat.Rd
man/geneSubset.Rd
man/geneSubsetTestResult.Rd
man/getOrgDB.Rd
man/getPkgs.Rd
man/getTxDB.Rd
man/multisynvizPlots.Rd
man/orgmOrgDB.Rd
man/orgmTxDB.Rd
man/orgmsAdd.Rd
man/orgmsCollection.init.Rd
man/orgmsCollectionTestResult.Rd
man/synvizDataTest.Rd
man/synvizPlot.Rd
man/synvizPlotData.Rd
paper/paper.bib
paper/paper.md
paper/pics/Hsplot.png
paper/pics/Msplot.png
tests/testthat.R
tests/testthat/test_coordFormat.R
tests/testthat/test_geneSubset.R
tests/testthat/test_getDB.R
tests/testthat/test_orgmsCollection.R
tests/testthat/test_synvizPlot.R
vignettes/SyntenyViz_workflow.Rmd
vignettes/SyntenyViz_workflow.html
vignettes/images/DPP4.png
vignettes/images/Hsplot.png
vignettes/images/Msplot.png
