Man pages for DPP4ResearchGroup/SyntenyViz
Visualize the synteny of a gene structure across species
| coordFormat | Format input strings into GRange object |
| geneSubset | Search and annotate genes against known gene databases based... |
| geneSubsetTestResult | A GRange Object |
| getOrgDB | Search for orgDB |
| getPkgs | Download organism AnnotationDbi |
| getTxDB | Search for TxDB |
| multisynvizPlots | multisynvizPlots A multi synteny plot for comparison and new... |
| orgmOrgDB | A list of available orgDB objects as a data.frame |
| orgmsAdd | orgmsAdd Add a new search target in GRange format into... |
| orgmsCollection.init | orgmsCollection.init Initiate the orgmsCollection to an empty... |
| orgmsCollectionTestResult | A list contains expected output for test functions. |
| orgmTxDB | A list of available TxDB objects as a data.frame |
| SyntenyViz | Package SyntenyViz |
| synvizDataTest | A synvizData object that is used to test the integrity of... |
| SynVizOrgms | A data table that is used to store available organisms for... |
| synvizPlot | synvizPlot A plot function to plot synteny conversation... |
| synvizPlotData | synvizPlotData A data retrive function to prepare the data... |
