genomic_count: Genomic Count
In DanielRivasMD/Rpack.chlSab: chlSab Vervet green monkey

Description Usage Arguments Value See Also

View source: R/genomic_count.R

Description

genomic_count(f_Chromosome, f_tmp_dir, f_which_vervet, ge_data_bin_dir,
  ge_vervet_ls, ge_bin_size, ge_bin_overlaps, ge_forward_seq,
  ge_reverse_seq, ge_forward_strand, ge_reverse_strand, ge_pos_margin,
  ge_est_insert_size, age_nombres, age_strand, b_ervVchr)

`f_Chromosome`	BiocParallel option
`f_tmp_dir`	Directory from Uppmax SLURM
`f_which_vervet`	Indiviual as SLURM batch array
`ge_data_bin_dir`	Project Global Enviorment option
`ge_vervet_ls`	Project Global Enviorment option
`ge_bin_size`	Project Global Enviorment option
`ge_bin_overlaps`	Project Global Enviorment option
`ge_forward_seq`	Project Global Enviorment option
`ge_reverse_seq`	Project Global Enviorment option
`ge_forward_strand`	Project Global Enviorment option
`ge_reverse_strand`	Project Global Enviorment option
`ge_pos_margin`	Project Global Enviorment option
`ge_est_insert_size`	Project Global Enviorment option
`age_nombres`	Project As Global Enviorment option
`age_strand`	Project As Global Enviorment option
`b_ervVchr`	Boolen selector for 'ERV' or 'CHR'