permissR: Load GBFF/GBK and FASTA file
In DanielleMStevens/permissR: An R package for finding permissive sites
Description
Usage
Arguments
Value
Description
This function loads both a DNA contig fasta file and annotation genbank file
(gbff/gbk) to search for regions a minimum 1.5 kB in size which carry no
encoded information to clone into pSelAct-Express for integrative expression.
Usage
1
permissR(genbank_file_path, fasta_file_path)
Arguments
genbank_file_path
takes in path of genbank file
fasta_file_path
takes in path of fasta file
Value
Plots and files of potential permissive sites in a provided bacterial genome
DanielleMStevens/permissR documentation built on Dec. 17, 2021, 4:04 p.m.
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Description Usage Arguments Value
Description
This function loads both a DNA contig fasta file and annotation genbank file (gbff/gbk) to search for regions a minimum 1.5 kB in size which carry no encoded information to clone into pSelAct-Express for integrative expression.
Usage
1 | permissR(genbank_file_path, fasta_file_path)
|
Arguments
genbank_file_path |
takes in path of genbank file |
fasta_file_path |
takes in path of fasta file |
Value
Plots and files of potential permissive sites in a provided bacterial genome
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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