Man pages for DavidPatShuiFong/dMeasure
case finding in the EMR (Best Practice)
| add_age | Add age to a given reference date |
| administrative | dMeasureAppointments class administrative lists |
| appointments | dMeasureAppointments class appointment lists |
| asplenic_list | list of patients Asplenia |
| asthma_list | list of patients with asthma |
| asthmaplan_obs | List of asthma plan recordings |
| ATSI_35_44_list | list of patients who are 35 to 44 years, and ATSI, at time of... |
| atsi_list | list of patients recorded ATSI ethnicity |
| BloodPressure_obs | List of blood pressure observations/recordings |
| bmi30_list | list of patients with BMI>=30 (obesity) |
| BPdatabase | show database configurations |
| BPdatabaseChoice | choose (or read) database choice |
| calc_age | Calculate age a given reference date |
| calc_age_months | Calculate age a given reference date, in months |
| cancerscreen | CancerScreen - bowel cancer and cervical screening |
| cardiacdisease_list | list of patients with cardiac conditions |
| check_subscription | check the subscription database |
| Cholesterol_obs | List of cholesterol observations/recordings |
| choose_clinicians | chosen clinicians |
| choose_date | Choose date |
| choose_location | Choose location |
| chronicliverdisease_list | list of patients with chronic liver disease |
| chroniclungdisease_list | list of patients with chronic lung disease |
| chronicrenaldisease_list | list of patients with chronic lung disease |
| clinician_list | find available list of clinician appointments to view |
| conditions | condition methods |
| configuration_file_path | read (or set) configuration filepath |
| configuration_file_yaml | read (or set) configuration filepath in YAML |
| configuration_location | Configuration - location |
| configuration_password | Configuration - password |
| configuration_server | Configuration - server |
| configuration_user | Configuration - user |
| contact | dMeasureContact contact lists |
| contactConditions | dMeasure contactConditions contact lists with conditions |
| cst_eligible_list | list of patients who are cervical screening eligible at time... |
| cvd_list | list of patients with cardiovascular disease |
| dataquality | Data Quality |
| dateformat_choice | choose (or read) dateformat choice |
| diabetes_list | list of patients with diabetes |
| diabetes_type1_list | list of patients with diabetes type 1 |
| diabetes_type2_list | list of patients with diabetes type 2 |
| dMeasure | dMeasure class |
| dot-identified_user | returns information about the identified user |
| eGFR_obs | List of eGFR observations/recordings |
| empty_password | is password for the current identified user available? |
| familialHypercholesterolaemia_list | list of patients with familial hypercholesterolaemia |
| fifteenplus_list | list of patients who are fifteen years or more in age at time... |
| filter_appointments | List of appointments |
| filter_appointments_time | List of appointments with 'human (and R)' readable... |
| filter_correspondence | List of correspondence |
| filter_correspondence_appointment | List of correspondence with appointments |
| filter_correspondence_named | List of correspondence, with patient names |
| filter_investigations | List of investigations |
| filter_investigations_appointment | List of investigations with appointments |
| filter_investigations_named | List of investigations, with patient names |
| formatdate | formatdate function |
| fortyfiveseventyfour_list | list of patients who are 45 to 74 years age at time of $Date |
| glucose_obs | List of Glucose observations/recordings |
| haemoglobinopathy_list | list of patients Haemoglobinopathy |
| HbA1C_obs | List of HbA1C observations/recordings |
| hiv_list | list of patients HIV |
| hrmin | Calculate seconds to a 'time' starting from midnight |
| immunization | Immunisation |
| incoming_view | incoming (investigations and correspondence) view |
| influenzaVax_obs | List of influenza immunization observations/recordings |
| initialize_data_table | initialize_data_table |
| initialize_emr_tables | initialize the tables of the EMR database |
| intellectualDisability_list | list of patients with intellectual disability |
| interval | Calculate period between two dates |
| list_allergy | List of patients with allergy (or adverse reaction)... |
| list_appointments | List of appointments with date of birth |
| list_asthma_details | list_asthma |
| list_contact_15plus | List of those aged 15 plus (as of 'date_to') in the contact... |
| list_contact_45_74 | List of those aged 45 to 74 years (as of 'date_to') in the... |
| list_contact_65plus | List of those aged 65 plus (as of 'date_to') in the contact... |
| list_contact_75plus | List of those aged 75 years or more (as of 'date_to') in the... |
| list_contact_appointments | List of contacts (appointment type) |
| list_contact_asthma | List of asthma in the contact list |
| list_contact_ATSI_35_44 | List of those aged 35 years to 44 years and ATSI (as of... |
| list_contact_chroniclungdisease | List of chronic lung disease in the contact list |
| list_contact_count | List of contacts counts |
| list_contact_cst | List of those eligible (as of 'date_to') for cervical... |
| list_contact_diabetes | List of diabetics in the contact list |
| list_contact_services | List of contacts (service type) |
| list_contact_visits | List of contacts (visit type) |
| list_cst | Cervical screening list with tags |
| list_cst_details | Cervical screening list details |
| list_dataQuality | List of patients for data quality check |
| list_familyHx | List of patients with family history recordings |
| list_fobt | Bowel cancer screening list |
| list_influenza | List of patients potentially eligible for influenza vaccine |
| list_mammogram | Breast cancer screening list |
| list_measlesVax | List of patients potentially eligible for measles vaccine |
| list_socialHx | List of patients with social history recordings |
| list_vax | List of patients potentially eligible for vaccines |
| list_visits | List of visits with date of birth |
| list_zostavax | List of patients potentially eligible for Zostavax |
| location.delete | location.delete |
| location.insert | location.insert |
| location_list | Show list of locations |
| location.list | location.list |
| location.permission | location.permission |
| location.update | location.update |
| LVH_list | list of patients with left ventricular hypertrophy |
| malignancy_list | list of patients recorded malignancy |
| mammogram_eligible_list | list of patients who are breast cancer screening eligible at... |
| match_user | Match user with current 'identified' system user |
| neurologic_list | list of patients with neurologic disease |
| open_configuration_db | Open the SQL connection to the configuration from the SQL... |
| open_emr_db | opens the EMR database |
| parent_list | list of patients who are listed as the head of family with a... |
| password.reset | password.reset |
| password.set | Set password of currently identified user |
| paste2 | paste which can ignore NA and empty strings |
| PersistentProteinuria_obs | List of patients with persistent proteinuria |
| pipe | Pipe operator magrittr |
| postnatal_list | list of patients who are pregnant at the 'appointment' date |
| pregnant_list | list of patients who are pregnant at the 'appointment' date |
| read_configuration_db | read the SQL configuration database |
| read_dMeasureModules | read_dMeasureModules |
| read_subscription_db | read the subscription database |
| refugeeAsylum_list | list of patients with history of refugee or asylum seeker |
| restrictionTypes_list | returns list of the restriction types |
| semantic_button | Create semantic/fomantic buttons with attached tooltips (text... |
| semantic_tag | Create semantic/fomantic tags with attached tooltips (text... |
| server.delete | server.delete |
| server.insert | server.insert |
| server.list | server.list |
| server.permission | server.permission |
| server.update | server.update |
| seventyfiveplus_list | list of patients who are seventy-five years or more in age at... |
| simple_decode | Simple decoder |
| simple_decode_base64 | Simple decoder base64 |
| simple_encode | Simple encoder |
| simple_encode_base64 | Simple encoder base64library |
| simple_tag | Simple tagger |
| simple_tag_compare | Simple tag comparison |
| sixtyfiveplus_list | list of patients who are sixty-five years or more in age at... |
| smoking_obs | List of smoking observations/recordings |
| transplant_list | list of patients with transplant |
| trisomy21_list | list of patients with trisomy21 |
| update_subscription | Update subscription database |
| UrineAlbumin_obs | List of urine albumin observations/recordings |
| useradmin.permission | useradmin.permission |
| UserConfig | show user configurations |
| userconfig.delete | userconfig.delete |
| userconfig.insert | userconfig.insert |
| UserConfigLicense | show user configurations with license |
| userconfig.list | userconfig.list |
| userconfig.update | userconfig.update |
| UserFullConfig | UserFullConfig |
| user_login | check password against the current identified user |
| user_logout | Logout current identified user |
| userrestriction.change | userrestriction.change |
| userrestriction.list | userrestriction.list |
| verify_license | verify license/subscription |
| WriteLog | WriteLog |
