checkSeq: validate the dot-bracket form sequences
In Deemolotus/gscVisualizer: Visualize The Difference among Gene Sequences
Description
Usage
Arguments
Value
Examples
Description
A function that check if the sequence is validate, if the number of ( is not equal to
the number of ), then the motif sequence is not complete. When calling the dotComp
function will also run this funtion for validation.
Usage
1
checkSeq(seqs)
Arguments
seqs
A string represent an RNA secondary structure in dot bracket form
Value
Returns an empty string when the sequence is validate, return an string "error"
if the sequence is not validate
Examples
1
2
#this should return an empty string
checkSeq("...(((...)))...")
Deemolotus/gscVisualizer documentation built on Dec. 31, 2020, 11:55 a.m.
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Description Usage Arguments Value Examples
Description
A function that check if the sequence is validate, if the number of ( is not equal to the number of ), then the motif sequence is not complete. When calling the dotComp function will also run this funtion for validation.
Usage
1 | checkSeq(seqs)
|
Arguments
seqs |
A string represent an RNA secondary structure in dot bracket form |
Value
Returns an empty string when the sequence is validate, return an string "error" if the sequence is not validate
Examples
1 2 | #this should return an empty string
checkSeq("...(((...)))...")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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