vis_depth: Visualize the effect of varying the m parameter on the mean...
In DevonDeRaad/RADstackshelpR: Optimize the De Novo Stacks Pipeline via R
vis_depth R Documentation
Visualize the effect of varying the m parameter on the mean depth of each sample
Description
This function takes the list of dataframes output by optimize_m() as input.
The function then uses ggplot2 to visualize the effect of m on depth.
Usage
vis_depth(output = NULL)
Arguments
output
A list containing 5 dataframes generated by optimize_m()
Value
A plot showing the depth of each sample at each given m value
Examples
vis_depth(output =
readRDS(system.file("extdata","optimize.m.output.RDS",package="RADstackshelpR",mustWork=TRUE)))
DevonDeRaad/RADstackshelpR documentation built on June 18, 2022, 4:08 p.m.
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| vis_depth | R Documentation |
Visualize the effect of varying the m parameter on the mean depth of each sample
Description
This function takes the list of dataframes output by optimize_m() as input. The function then uses ggplot2 to visualize the effect of m on depth.
Usage
vis_depth(output = NULL)
Arguments
output |
A list containing 5 dataframes generated by optimize_m() |
Value
A plot showing the depth of each sample at each given m value
Examples
vis_depth(output =
readRDS(system.file("extdata","optimize.m.output.RDS",package="RADstackshelpR",mustWork=TRUE)))
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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