README.md

title: "blepd: Branch Length Evaluation in Phylogenetic Diversity Analysis" author: "D.R. Miranda Esquivel" date: "2024, March 27"

These functions evaluate:

  1. Whether a change in one or more branch lengths generates a change in the area(s) selected using PD; and when applicable, the terminal branch length value for that change.
  2. The behavior of PD when terminal or internal branch lengths are swapped using a null model.

A worked example (using Rhinnoclemmys) can be found at [https://github.com/Dmirandae/blepd/blob/primary/docs/RhinnoclemmysExample.pdf].

The algorithm's description can be found at [https://github.com/Dmirandae/blepd/blob/master/docs/blepdAlgorithm.Rmd].



Dmirandae/blepd documentation built on April 2, 2024, 12:24 p.m.