makeRatio: A function to calculate 'score' ratio between two bed...
In DzmitryGB/Repliscope: Replication Timing Profiling using DNA Copy Number
Description
Usage
Arguments
Examples
Description
A function to calculate 'score' ratio between two bed dataframes
makeRatio merges two supplied bed dataframes, calculates ratio of their "score" values
normalises the ratio by the 'score' sums.
Usage
1
makeRatio(bedRep, bedNonRep)
Arguments
bedRep
Bed dataframe containing read counts from a replicating sample (dataframe).
The bed dataframe must contain "chrom","chromStart", "chromEnd" and "score" columns.
bedNonRep
Bed dataframe containing read counts from a non-replicating sample (dataframe).
The bed dataframe must contain "chrom","chromStart", "chromEnd" and "score" columns.
Examples
1
DzmitryGB/Repliscope documentation built on Dec. 5, 2019, 3:16 a.m.
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Description Usage Arguments Examples
Description
A function to calculate 'score' ratio between two bed dataframes makeRatio merges two supplied bed dataframes, calculates ratio of their "score" values normalises the ratio by the 'score' sums.
Usage
1 | makeRatio(bedRep, bedNonRep)
|
Arguments
bedRep |
Bed dataframe containing read counts from a replicating sample (dataframe). The bed dataframe must contain "chrom","chromStart", "chromEnd" and "score" columns. |
bedNonRep |
Bed dataframe containing read counts from a non-replicating sample (dataframe). The bed dataframe must contain "chrom","chromStart", "chromEnd" and "score" columns. |
Examples
1 |
R Package Documentation
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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