API for EESI/themetagenomics
Exploring Thematic Structure and Predicted Functionality of 16s rRNA Amplicon Data
| Global functions | |
|---|---|
| DAVID | Man page |
| GEVERS | Man page |
| check_for_splines | Source code |
| check_seed | Source code |
| cnn | Man page Source code |
| create_modelframe | Source code |
| create_multiclasses_table | Source code |
| dense_rank | Source code |
| download_ref | Man page Source code |
| est | Man page Source code |
| est.functions | Man page Source code |
| est.hmc | Man page Source code |
| est.ml | Man page Source code |
| est.topics | Man page Source code |
| est_functions | Man page |
| est_topics | Man page |
| est_topics_backend | Man page Source code |
| expand_multiclass | Source code |
| extract | Man page Source code |
| extract.effects | Man page Source code |
| extract_spline_info | Source code |
| extract_stan_summary | Man page Source code |
| find_topics | Man page Source code |
| find_topics.themetadata | Source code |
| format_gene_metadata | Source code |
| format_gene_table | Source code |
| format_to_docs | Source code |
| jsd | Source code |
| make_ppd_x | Source code |
| norm10 | Source code |
| normz | Source code |
| picrust | Man page Source code |
| picrust_otu | Man page Source code |
| platform_sep | Source code |
| ppd_weights | Source code |
| predict.functions | Man page |
| predict.topics | Man page Source code |
| predict_functions | Man page |
| predict_topics | Man page |
| prepare_data | Man page Source code |
| pretty_taxa_names | Source code |
| print.effects | Source code |
| print.functions | Source code |
| print.topics | Source code |
| rename_taxa_to_other | Source code |
| resume | Man page Source code |
| resume.effects | Man page Source code |
| resume.stanfit | Source code |
| rmvnorm | Source code |
| s | Man page Source code |
| sample_last | Source code |
| stm_wrapper | Man page Source code |
| sum_taxa_by_group | Source code |
| t4f | Man page Source code |
| vis | Man page Source code |
| vis.binary | Man page Source code |
| vis.continuous | Man page Source code |
| vis.effects | Man page Source code |
| vis.functions | Man page Source code |
| vis.taxa | Man page Source code |
| vis.topics | Man page Source code |
