Description Usage Arguments Value Note Author(s) References See Also Examples
View source: R/get_powers_std.R
This function calculates scaled powers assimilation, mobilisation, somatic maintenance, maturity maintenance, growth, reproduction and dissipation as function of length and scaled reserves
1 | get_powers_std(p, L, e)
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p |
A named list resulting from the importing of DEB parameters using the function |
L |
Structural length of the organism for which the powers are being calculated (it can be a vector) |
e |
Scaled reserves at which the variables are to be calculated (see Kooijman 2010 for a definition of e). It is a value between 0 and 1. |
This function return a vector/matrix containing s scaled powers p_A, p_C, p_S, p_J, p_G, p_R, p_D They can be unscaled by * L_m^2 p_Am p_A = assimilation power; p_C = mobilisation power; p_S = somatic manteinance power; p_J = maturity mainenance power; p_G = growth power; p_R = reproduction power; p_D = dissipation power;
Scaled values obtained here can be unscaled for further use. See examples. For further info on temperature corrections see Kooijman 2010 and t_corr
Antonio Aguera. Havforskningsinstituttet, Austevoll, Norway (for R version)
Kooijman SALM (2010) Dynamic Energy Budget theory for metabolic organisation, Third edn. Cambridge University Press, Cambridge, 509 pp.
Lika K, Kearney MR, Freitas V et al. (2011) The covariation method for estimating the parameters of the standard Dynamic Energy Budget model I: Philosophy and approach. Journal of Sea Research, 66, 270_277.
Lika K, Kearney MR, Kooijman SALM (2011) The covariation method for estimating the parameters of the standard Dynamic Energy Budget model II: Properties and preliminary patterns. Journal of Sea Research, 66, 278_288.
1 2 3 4 5 | ## get the parameters for the species
p <- get_DEB_pars('parameters_Mytilus_edulis.csv')
e <- 1 # maximum scaled reserve (no food limitation)
L <- 5 * p$del_M # structural length from physical length (5cm arm length)
pACSJGRD <- get_powers_std(p, L, e)
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