calc_genetic_similarity: Calculate the genetic similarity between two individuals...
In Eiriksen/Genotools: Genotools
View source: R/script - gene-match-o-matic 2000.R
calc_genetic_similarity R Documentation
Calculate the genetic similarity between two individuals (based on SNPs)
Description
takes two vectors of SNPs,
Each element in the vector should be the genotypes of one SNP, written as bases, e.g "CT" "CC" "AT" etc. Order, e.g. "CT" or "TC" is not taken into account.
It's important that the order of SNPs in the two vectors are the same.
Returns an integer between 1 and 0 (0 = 0
Usage
calc_genetic_similarity(sample1, sample2, naCutoff = 50)
Arguments
SNPs1
the first vector of SNPs
SNPs2
the second vector of SNPs
Eiriksen/Genotools documentation built on Oct. 1, 2022, 1:40 a.m.
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View source: R/script - gene-match-o-matic 2000.R
| calc_genetic_similarity | R Documentation |
Calculate the genetic similarity between two individuals (based on SNPs)
Description
takes two vectors of SNPs, Each element in the vector should be the genotypes of one SNP, written as bases, e.g "CT" "CC" "AT" etc. Order, e.g. "CT" or "TC" is not taken into account. It's important that the order of SNPs in the two vectors are the same. Returns an integer between 1 and 0 (0 = 0
Usage
calc_genetic_similarity(sample1, sample2, naCutoff = 50)
Arguments
SNPs1 |
the first vector of SNPs |
SNPs2 |
the second vector of SNPs |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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