EpiModel/EasyABCMPI: Approximate Bayesian Computation for EpiModel on High-Performance Computing Clusters
Implementation of Approximate Bayesian Computation with Sequential Monte Carlo Methods (ABC-SMC) optimized for use with EpiModel R package epidemic simulations running on High-Performance Computing (HPC) cluster environments such as MPI and Slurm. This package uses AMC-SMC algorithms originally developed for the EasyABC R package.
Getting started
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Package details |
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| Author | Samuel Jenness, with original ABC-SMC statistical algorithms based on the EasyABC R package (authors: Franck Jabot, Thierry Faure, Nicolas Dumoulin, and Carlo Albert). |
| Maintainer | Samuel Jenness <samuel.m.jenness@emory.edu> |
| License | GPL-3 |
| Version | 1.0 |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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