Description Usage Arguments Value
View source: R/growth-parameters.R
Calculates colony growth parameters by fitting a smooth growth curve using
smooth.spline.
1 | growth_parameters(time, size, ...)
|
time |
Numeric - time of growth. |
size |
Numeric - size of colony. |
... |
Further arguments passed to |
Returns a data frame with the following parameters derived from the fit curve:
| A | Maximum growth. |
| A_t | Time at maximum growth. |
| mu | Maximum growth rate. |
| mu_t | Time at maximum growth rate. |
| mu_y | Growth at maximum growth rate. |
| lambda | Lag phase (x-intercept of line tangent to max growth rate). |
| b | y-intercept of line tangent to max growth rate. |
| integral | Area under growth curve. |
| spar | Smoothing parameter used to generate curve - can be
set by passing a spar argument to
smooth.spline.
|
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