createRootBarG: Plot Root Length Data

In ErikEnsminger/FastRPA: Analysis tool for root length measurements

Plot Root Length Data

Description

A function that plots the root length paramters based on treatment and gene Lines.

Usage

createRootBarG(inputFile)

Arguments

inputFile

A string representing the path for the input file containing root measurement data. Precondition: columns with data to be plotted must include / character. Columns of gene lines must be named "geneLines"

Value

Returns a list object with results

• outputPlot - A bar plot with mean root growth of root Treamtent with respect to root Lines

• outputText - the data frame of the raw data used to produce outputPlot

Author(s)

Erik Ensminger [e-mail]

References

Steipe B., ABC project (.utility 4.07) A Bioinformatics Course: Applied Bioinformatics Link.

Examples

# Example 1:
# Creating Bar plot of input data
## Not run: 
library(plyr)
input <- system.file("extdata", "inputFileFunc3.csv", package = "FastRPA")
filterData <- createRootBarG(input)
filterData$outputPlot  # outputs the plot when called
filterData$outputText  # returns the dataframe

## End(Not run)

ErikEnsminger/FastRPA documentation built on Sept. 29, 2023, 12:35 a.m.