change_genotype_to_frequency | change_allele_to_requencies |
check_object_or_file | check_object_or_file |
covariate_test_data | Example of a covariate data set. |
gencode_position | Gene positions. |
generate_test_data | Generate test data |
genotype_test_data | Example of a genotype data set. |
genotype_test_locations | Example of a genotype position data set. |
gepo | Genotype positions. |
get_os | Determine the current operating system. |
init_basic_directories | Creates initial file structure for leqtar output. |
leqtar | Leqtar |
leqtar_analysis | leqtar_analysis function |
leqtar_create_genotype_boxplots | leqtar_create_genotype_boxplots |
leqtar_create_manhattan_plots | leqtar_create_manhattan_plots |
leqtar_genotypes_to_frequencies | leqtar_genotypes_to_frequencies |
leqtar_process_files | leqtar_process_files function |
leqtar_results | leqtar_results |
phenotype_test_data | Example of a phenotype position data set. |
phenotype_test_locations | Example of a phenotype data set. |
prepare_df_qtls | prepare_df_qtls |
process_arguments | Processes the user input arguments |
read_files | read_files function |
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