Man pages for ErikSchutte/leqtar
Linear eQTL analysis in R

change_genotype_to_frequencychange_allele_to_requencies
check_object_or_filecheck_object_or_file
covariate_test_dataExample of a covariate data set.
gencode_namesGencode gene id's and gene names.
gencode_positionGene positions.
generate_test_dataGenerate test data
genotype_test_dataExample of a genotype data set.
genotype_test_locationsExample of a genotype position data set.
gepoGenotype positions.
get_osDetermine the current operating system.
init_basic_directoriesCreates initial file structure for leqtar output.
leqtarLeqtar
leqtar_analysisleqtar_analysis function
leqtar_create_genotype_boxplotsleqtar_create_genotype_boxplots
leqtar_create_manhattan_plotsleqtar_create_manhattan_plots
leqtar_genotypes_to_frequenciesleqtar_genotypes_to_frequencies
leqtar_process_filesleqtar_process_files function
leqtar_resultsleqtar_results
phenotype_test_dataExample of a phenotype position data set.
phenotype_test_locationsExample of a phenotype data set.
prepare_df_qtlsprepare_df_qtls
process_argumentsProcesses the user input arguments
read_filesread_files function
ErikSchutte/leqtar documentation built on June 7, 2017, 6:05 p.m.