tresh: RPKM/FPKM/TPM Tresholding
In EvansLaboratory/OBIF: Omics-Based Interaction Framework
tresh R Documentation
RPKM/FPKM/TPM Tresholding
Description
The tresh function is used to curate the dataset to include only the features that meet the treshold criteria across all samples.
The treshold is user-defined based and relative to the expression values in the dataset as PRKM/FPKM/TPM.
This function does not perform transformations on the expresion values.
Usage
tresh(expr.val, treshold)
Arguments
expr.val
Text
treshold
A numeric value with the desired treshold to apply to the dataset.
Value
A data frame with the individual p-values per feature for main effects, simple main effects and interaction effects.
EvansLaboratory/OBIF documentation built on March 29, 2022, 8:38 a.m.
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| tresh | R Documentation |
RPKM/FPKM/TPM Tresholding
Description
The tresh function is used to curate the dataset to include only the features that meet the treshold criteria across all samples. The treshold is user-defined based and relative to the expression values in the dataset as PRKM/FPKM/TPM. This function does not perform transformations on the expresion values.
Usage
tresh(expr.val, treshold)
Arguments
expr.val |
Text |
treshold |
A numeric value with the desired treshold to apply to the dataset. |
Value
A data frame with the individual p-values per feature for main effects, simple main effects and interaction effects.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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