Files in Exp-Micro-Ecol-Hub/dmdScheme
Domain Specific MetaData Scheme

.Rbuildignore
.covrignore
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.github/workflows/lint.yaml
.github/workflows/pkgdown.yaml
.github/workflows/test-coverage.yaml
.gitignore
.zenodo.json
DESCRIPTION
LICENSE
Makefile
NAMESPACE
NEWS.md Notes.md R/aaa.R R/as_dmdScheme.R R/as_dmdScheme.dmdSchemeData_raw.R R/as_dmdScheme.dmdSchemeSet_raw.R R/as_dmdScheme.xml_document.R R/as_dmdScheme_raw.R R/as_dmdScheme_raw.dmdSchemeData.R R/as_dmdScheme_raw.dmdSchemeSet.R R/as_dmdScheme_raw.xml_document.R R/as_eml.R R/as_eml.default.R R/as_xml.R R/as_xml.dmdSchemeData.R R/as_xml.dmdSchemeSet.R R/as_xml_list.R R/as_xml_list.dmdSchemeSet.R R/cache.R R/cat_ln.R R/dmdScheme.R R/dmdScheme_example.R R/dmdScheme_raw.R R/format_dmdScheme_xlsx.R R/imports_eml.R R/lookup_tokens.R R/make_example.R R/make_index.R R/make_index.dmdSchemeSet.R R/make_new_package.R R/open_new_spreadsheet.R R/pkg.dmdScheme.R R/print.dmdSchemeData.R R/print.dmdSchemeSet.R R/print.dmdScheme_validation.R R/read_excel.R R/read_excel_raw.R R/read_xml.R R/report.R R/report.character.R R/report.dmdScheme_validation.R R/run_app.R R/scheme_active.R R/scheme_default.R R/scheme_download.R R/scheme_install.R R/scheme_install_r_package.R R/scheme_installed.R R/scheme_list.R R/scheme_list_in_repo.R R/scheme_make.R R/scheme_path_index_template.R R/scheme_path_xlsx.R R/scheme_path_xml.R R/scheme_repo.R R/scheme_uninstall.R R/scheme_use.R R/toTranspose.R R/upgrade_old_files.R R/validate.R R/validate.character.R R/validate.dmdSchemeSet_raw.R R/validate_func.R R/validation_error_functions.R R/write_excel.R R/write_xml.R Readme.md Release_Checklist.Rmd
_pkgdown.yml
codecov.yml
codemeta.json
dmdScheme.Rproj
dmdScheme_papers.bib
inst/CITATION
inst/aaa.R inst/index.md
inst/reports/.gitignore
inst/reports/validation_report.Rmd
inst/shiny_apps/dmd_app/.gitignore
inst/shiny_apps/dmd_app/server.R inst/shiny_apps/dmd_app/ui.R man/as_dmdScheme.Rd man/as_dmdScheme_raw.Rd man/as_eml.Rd man/as_xml.Rd man/as_xml_list.Rd man/cache.Rd man/cat_ln.Rd man/dmdScheme.Rd man/dmdScheme_example.Rd man/dmdScheme_raw.Rd man/format_dmdScheme_xlsx.Rd man/lookup_tokens.Rd man/make_example.Rd man/make_index.Rd man/make_new_package.Rd man/new_dmdScheme_validation.Rd man/open_new_spreadsheet.Rd man/pkg.dmdScheme.Rd man/print.dmdSchemeData.Rd man/print.dmdSchemeSet.Rd man/print.dmdScheme_validation.Rd man/print_dmdScheme_validation_details.Rd man/print_dmdScheme_validation_summary.Rd man/read_excel.Rd man/read_excel_raw.Rd man/read_xml.Rd man/report.Rd man/run_app.Rd man/scheme.Rd man/scheme_make.Rd man/scheme_path_index_template.Rd man/scheme_path_xlsx.Rd man/scheme_path_xml.Rd man/toTranspose.Rd man/upgrade_old_files.Rd man/valErr_TextErrCol.Rd man/valErr_extract.Rd man/valErr_info.Rd man/valErr_isOK.Rd man/validate.Rd man/validateAllowedValues.Rd man/validateDataFileMetaDataDataFileExists.Rd man/validateIDField.Rd man/validateStructure.Rd man/validateSuggestedValues.Rd man/validateTypes.Rd man/write_excel.Rd man/write_xml.Rd pkgdown/index.md
screenshots_highres/Spreadsheet_01_MdBibliometric.jpg
screenshots_highres/Spreadsheet_01_MdBibliometric.pdf
screenshots_highres/Spreadsheet_01_MdBibliometric.png
screenshots_highres/Spreadsheet_02_MdAuthor.jpg
screenshots_highres/Spreadsheet_02_MdAuthor.pdf
screenshots_highres/Spreadsheet_02_MdAuthor.png
screenshots_highres/Spreadsheet_03_Experiment.jpg
screenshots_highres/Spreadsheet_03_Experiment.pdf
screenshots_highres/Spreadsheet_03_Experiment.png
screenshots_highres/Spreadsheet_04_Genus.jpg
screenshots_highres/Spreadsheet_04_Genus.pdf
screenshots_highres/Spreadsheet_04_Genus.png
screenshots_highres/Spreadsheet_05_Treatment.jpg
screenshots_highres/Spreadsheet_05_Treatment.pdf
screenshots_highres/Spreadsheet_05_Treatment.png
screenshots_highres/Spreadsheet_06_Measurement.jpg
screenshots_highres/Spreadsheet_06_Measurement.pdf
screenshots_highres/Spreadsheet_06_Measurement.png
screenshots_highres/Spreadsheet_07_DataExtraction.jpg
screenshots_highres/Spreadsheet_07_DataExtraction.pdf
screenshots_highres/Spreadsheet_07_DataExtraction.png
screenshots_highres/Spreadsheet_08_DataFileMetadata.jpg
screenshots_highres/Spreadsheet_08_DataFileMetadata.pdf
screenshots_highres/Spreadsheet_08_DataFileMetadata.png
screenshots_highres/ValidationReport.jpg
screenshots_highres/ValidationReport.pdf
screenshots_highres/ValidationReport.png
screenshots_highres/app.jpg
screenshots_highres/app.pdf
screenshots_highres/app.png
screenshots_highres/original/Spreadsheet_01_MdBibliometric.png
screenshots_highres/original/Spreadsheet_02_MdAuthor.png
screenshots_highres/original/Spreadsheet_03_Experiment.png
screenshots_highres/original/Spreadsheet_04_Genus.png
screenshots_highres/original/Spreadsheet_05_Treatment.png
screenshots_highres/original/Spreadsheet_06_Measurement.png
screenshots_highres/original/Spreadsheet_07_DataExtraction.png
screenshots_highres/original/Spreadsheet_08_DataFileMetadata.png
screenshots_highres/original/ValidationReport.png
screenshots_highres/original/app.png
tests/testthat.R tests/testthat/CHECK---test-12-scheme_.R
tests/testthat/ref-07-print.dmdScheme.FFF.txt
tests/testthat/ref-07-print.dmdScheme.TFF.txt
tests/testthat/ref-07-print.dmdScheme.TTF.txt
tests/testthat/ref-07-print.dmdScheme.TTT.EMPTY.txt
tests/testthat/ref-07-print.dmdScheme.TTT.txt
tests/testthat/ref-08-validate.DIFFERENCES.rda
tests/testthat/ref-08-validate.character.CORRECT.rda
tests/testthat/ref-08-validate.dmdScheme.CORRECT.rda
tests/testthat/ref-09-print.dmdScheme.validation.details.txt
tests/testthat/ref-09-print.dmdScheme.validation.summary.txt
tests/testthat/ref-15-lookup_tokens.txt
tests/testthat/ref-16-make_index.txt
tests/testthat/test-02-make_example.R tests/testthat/test-03-as_dmdScheme.R tests/testthat/test-03-as_dmdScheme_raw.R tests/testthat/test-04-1-as_eml.R tests/testthat/test-04-as_xml.R tests/testthat/test-05-format_dmdScheme_xlsx.R tests/testthat/test-06-open_new_spreadsheet.R tests/testthat/test-07-print.dmdScheme.R tests/testthat/test-08-validate.R tests/testthat/test-09-print.dmdScheme_validation.R tests/testthat/test-10-excel.R tests/testthat/test-11-xml.R tests/testthat/test-13-upgrade_old_files.R tests/testthat/test-15-lookup_tokens.R tests/testthat/test-16-make_index.R
vignettes/.gitignore
vignettes/Develop_and_Use_the_dmdScheme.Rmd
vignettes/figs/Spreadsheet_01_MdBibliometric.jpg
vignettes/figs/Spreadsheet_01_MdBibliometric.pdf
vignettes/figs/Spreadsheet_02_MdAuthor.jpg
vignettes/figs/Spreadsheet_02_MdAuthor.pdf
vignettes/figs/Spreadsheet_03_Experiment.jpg
vignettes/figs/Spreadsheet_03_Experimentng.pdf
vignettes/figs/Spreadsheet_04_Genus.jpg
vignettes/figs/Spreadsheet_04_Genus.pdf
vignettes/figs/Spreadsheet_05_Treatment.jpg
vignettes/figs/Spreadsheet_05_Treatment.pdf
vignettes/figs/Spreadsheet_06_Measurement.jpg
vignettes/figs/Spreadsheet_06_Measurement.pdf
vignettes/figs/Spreadsheet_07_DataExtraction.jpg
vignettes/figs/Spreadsheet_07_DataExtraction.pdf
vignettes/figs/Spreadsheet_08_DataFileMetadata.jpg
vignettes/figs/Spreadsheet_08_DataFileMetadata.pdf
vignettes/figs/ValidationReport.jpg
vignettes/figs/ValidationReport.pdf
vignettes/figs/app.jpg
vignettes/figs/app.png.pdf
vignettes/figs/workflow_enterMetaData_R.png
vignettes/figs/workflow_enterMetaData_R.puml
vignettes/figs/workflow_enterMetaData_app_local.png
vignettes/figs/workflow_enterMetaData_app_local.puml
vignettes/figs/workflow_enterMetaData_app_online.cmapx
vignettes/figs/workflow_enterMetaData_app_online.png
vignettes/figs/workflow_enterMetaData_app_online.puml
vignettes/figs/workflow_newScheme.png
vignettes/figs/workflow_newScheme.puml
Exp-Micro-Ecol-Hub/dmdScheme documentation built on Aug. 31, 2022, 3:17 p.m.