aeq_mort: Extract AEQ mortality from Chinook FRAM database

In FRAMverse/framr: R for working with the Fishery Regulation Assessment Model (FRAM)

Extract AEQ mortality from Chinook FRAM database

Description

Extract AEQ mortality from Chinook FRAM database

Usage

aeq_mort(db, runs = NULL, stocks = NULL, drop_t1 = T, sum_ages = F)

Arguments

db	string, file path to database
runs	numeric, RunID(s) as ID or ID:ID
stocks	numeric, StockID(s) as ID or ID:ID
drop_t1	logical, should timestep 1 be excluded?
sum_ages	logical, should ages 2:5 be summed? (per run-s-f-t)

Value

a tibble of AEQ'd mortality, possibly aggregated over ages to the per run-stock-fishery-timestep total

Examples

## Not run: 

#showing M&UM for a given stock across runs
#with ages 2:5 summed for timesteps 2:4
aeq_mort("path/to/Chinook_FRAM_Database.mdb",
 runs = 1:4, stocks = 31:32, drop_t1 = T, sum_ages = T)


## End(Not run)

FRAMverse/framr documentation built on Jan. 29, 2023, 1:55 a.m.