Files in Fagan-Lab/constructnet
Network reconstruction from time series
.Rbuildignore
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.gitignore
DESCRIPTION
LICENSE
Makefile
NAMESPACE
R/base.R
R/convergent_cross_mapping.R
R/correlation_matrix.R
R/entropy.R
R/free_energy_minimization.R
R/granger_causality.R
R/graph.R
R/graphical_lasso.R
R/marchenko_pastur.R
R/maximum_likelihood_estimation.R
R/mutual_information_matrix.R
R/naive_transfer_entropy.R
R/random.R
R/thouless_anderson_palmer.R
R/threshold.R
R/utils-pipe.R
README.md
constructnet.Rproj
cran-comments.md
man/categorized_data.Rd
man/conditional_entropy.Rd
man/construct_random.Rd
man/convergent_cross_mapping_fit.Rd
man/correlation_matrix_fit.Rd
man/create_graph.Rd
man/fit.Rd
man/free_energy_minimization_fit.Rd
man/granger_causality_fit.Rd
man/graphical_lasso_fit.Rd
man/marchenko_pastur_fit.Rd
man/maximum_likelihood_estimation_fit.Rd
man/mutual_information_matrix_fit.Rd
man/naive_transfer_entropy_fit.Rd
man/pipe.Rd
man/thouless_anderson_palmer_fit.Rd
man/threshold.Rd
tests/testthat.R
tests/testthat/test-base-graph.R
tests/testthat/test_convergent_cross_mapping.R
tests/testthat/test_correlation_matrix.R
tests/testthat/test_free_energy_minimization.R
tests/testthat/test_granger_causality.R
tests/testthat/test_graph.R
tests/testthat/test_graphical_lasso.R
tests/testthat/test_marchenko_pastur.R
tests/testthat/test_maximum_likelihood_estimation.R
tests/testthat/test_threshold.R
