Files in Famingzhao/ConsensusTME
A Consensus Approach To Tumour Microenvironment Cell Estimation
.Rbuildignore
.gitignore
ConsensusTME.Rproj
Consensus_Signatures/ACC_Consensus_Signatures.txt
Consensus_Signatures/BLCA_Consensus_Signatures.txt
Consensus_Signatures/BRCA_Consensus_Signatures.txt
Consensus_Signatures/CESC_Consensus_Signatures.txt
Consensus_Signatures/CHOL_Consensus_Signatures.txt
Consensus_Signatures/COAD_Consensus_Signatures.txt
Consensus_Signatures/DLBC_Consensus_Signatures.txt
Consensus_Signatures/ESCA_Consensus_Signatures.txt
Consensus_Signatures/GBM_Consensus_Signatures.txt
Consensus_Signatures/HNSC_Consensus_Signatures.txt
Consensus_Signatures/KICH_Consensus_Signatures.txt
Consensus_Signatures/KIRC_Consensus_Signatures.txt
Consensus_Signatures/KIRP_Consensus_Signatures.txt
Consensus_Signatures/LGG_Consensus_Signatures.txt
Consensus_Signatures/LIHC_Consensus_Signatures.txt
Consensus_Signatures/LUAD_Consensus_Signatures.txt
Consensus_Signatures/LUSC_Consensus_Signatures.txt
Consensus_Signatures/MESO_Consensus_Signatures.txt
Consensus_Signatures/OV_Consensus_Signatures.txt
Consensus_Signatures/PAAD_Consensus_Signatures.txt
Consensus_Signatures/PCPG_Consensus_Signatures.txt
Consensus_Signatures/PRAD_Consensus_Signatures.txt
Consensus_Signatures/READ_Consensus_Signatures.txt
Consensus_Signatures/SARC_Consensus_Signatures.txt
Consensus_Signatures/SKCM_Consensus_Signatures.txt
Consensus_Signatures/STAD_Consensus_Signatures.txt
Consensus_Signatures/TGCT_Consensus_Signatures.txt
Consensus_Signatures/THCA_Consensus_Signatures.txt
Consensus_Signatures/THYM_Consensus_Signatures.txt
Consensus_Signatures/UCEC_Consensus_Signatures.txt
Consensus_Signatures/UCS_Consensus_Signatures.txt
Consensus_Signatures/UVM_Consensus_Signatures.txt
Consensus_Signatures/Unfiltered_Consensus_Signatures.txt
DESCRIPTION
LICENSE.md
NAMESPACE
Overview.png
R/ConsensusTME.R
README.md
data-raw/Bindea_genes.txt
data-raw/CIBERSORT_LM22.txt
data-raw/Danaher_genes.txt
data-raw/Davoli_genes.txt
data-raw/ESTIMATE_stromal_genes.txt
data-raw/MCP_genes.txt
data-raw/Method_data.RData
data-raw/Purity_immune_genes.txt
data-raw/Raw_Gene_List.RData
data-raw/methodSignatures.R
data-raw/useful_functions.R
data-raw/xCell_genes.txt
data/cancerAll.rda
data/consensusGeneSets.rda
data/methodSignatures.rda
man/ConsensusTME.Rd
man/buildConsensusGenes.Rd
man/cancerAll.Rd
man/consensusGeneSets.Rd
man/consensusTMEAnalysis.Rd
man/geneSetEnrichment.Rd
man/matchGeneSigs.Rd
man/methodSignatures.Rd
