In FelixErnst/EpiTxDb.Sc.sacCer3: Annotation package for EpiTxDb objects

BiocStyle::markdown(css.files = c('custom.css'))

Available resources

EpiTxDb.Sc.sacCer3 contains post-transcriptional RNA modifications from RMBase v2.0 [@Xuan.2017] and tRNAdb [@Juehling.2009] and can be accessed through the functions EpiTxDb.Sc.sacCer3.tRNAdb() and EpiTxDb.Sc.sacCer3.RMBase()

suppressPackageStartupMessages({
  library(EpiTxDb.Sc.sacCer3)
})

library(EpiTxDb.Sc.sacCer3)

etdb <- EpiTxDb.Sc.sacCer3.tRNAdb()
etdb

Modification information can be accessed through the typical function for an EpiTxDb object, for example modifications():

modifications(etdb)

For a more detailed overview and explanation of the functionality of the EpiTxDb class, have a look at the EpiTxDb package.

Sessioninfo

sessionInfo()

References

FelixErnst/EpiTxDb.Sc.sacCer3 documentation built on Jan. 24, 2021, 6:09 a.m.