Man pages for FelixErnst/RNAmodR
Detection of post-transcriptional modifications in high throughput sequencing data

aggregateAggregate data per positions
compareByCoordComparison of Samples
CoverageSequenceData-classCoverageSequenceData
EndSequenceData-classEnd5SequenceData/End3SequenceData/EndSequenceData
Modifier-classThe Modifier class
Modifier-functionsModifier/ModifierSet functions
ModifierSet-classThe ModifierSet class
modifySearching for modifications in 'SequenceData'
ModInosineModInosine
ModInosine-functionsFunctions for ModInosine
ModInosine-internalsModInosine internal functions
NormEndSequenceData-classNormEnd5SequenceData/NormEnd3SequenceData
PileupSequenceData-classPileupSequenceData
plotDataVisualizing data data from a 'SequenceData',...
plotROCROCR functions for 'Modifier' and 'ModifierSet' objects
ProtectedEndSequenceData-classProtectedEndSequenceData
RNAmodRRNAmodR
RNAmodR-datasetsExample data in the RNAmodR package
RNAmodR-developmentRNAmodR developments functions
RNAmodR-internalsRNAmodR internal functions
RNAmodR-packageRNAmodR: Detection of post-transcriptional modifications in...
SequenceData-classThe SequenceData class
SequenceDataFrame-classThe SequenceDataFrame class
SequenceData-functionsSequenceData/SequenceDataSet/SequenceDataList/SequenceDataFrame...
SequenceDataList-classThe SequenceDataList class
SequenceDataSet-classThe SequenceDataSet class
SequenceModDNAStringSetTrack-classModDNASequenceTrack
SequenceModRNAStringSetTrack-classModRNASequenceTrack
settingsSettings for 'Modifier' objects
statsRetrieving information about used reads in RNAmodR
subsetByCoordSubsetting data from a 'SequenceData', 'SequenceDataSet',...
FelixErnst/RNAmodR documentation built on March 27, 2024, 2:42 a.m.