Files in FemeniasM/ExplorATEproject
Explore Active Transposable Elements from RNAseq data
.Rbuildignore
.gitignore
DESCRIPTION
ExplorATEproject.Rproj
NAMESPACE
R/idTEsProt.r
R/import.RTEs.r
R/mk.reference.r
R/nonMatching.r
R/ovlp.res.r
R/read.RepMask.r
R/read.alignfile.r
R/read.gff3.r
R/read.outfmt6.r
R/readalin_sh.r
R/rm.cotransRep.r
R/run.salmon.r
R/split.vec.r
README.md
_config.yml
data/idTEsProt.rda
data/readalin_sh.rda
docs/_config.yml
man/grapes-not-in-grapes.Rd
man/idTEsProt.Rd
man/import.RTEs.Rd
man/mk.reference.Rd
man/ovlp.res.Rd
man/read.RepMask.Rd
man/read.alignfile.Rd
man/read.gff3.Rd
man/read.outfmt6.Rd
man/readalin_sh.Rd
man/rm.cotransRep.Rd
man/run.salmon.Rd
man/split.vec.Rd
user_guide/ExplorATE_userGuide_v1.1.Rmd
user_guide/ExplorATE_userGuide_v1.1.pdf
user_guide/flowchartMO.png
user_guide/flowchart_nonMO.png
user_guide/index.html
vignettes/vignette_ExplorATE_v1.1.R
vignettes/vignette_ExplorATE_v1.1.Rmd
vignettes/vignette_ExplorATE_v1.1.html
vignettes/vignette_ExplorATE_v1.1.pdf
