PlotScree: Plot a Screeplot from a ResPCALMEffects list

In FranceschiniS/LMWiRe: R Routines for Linear Model with Wide Response

Description

Plot a Screeplot of the Principal Component variances

Usage

PlotScree(ResPCALMEffects, EffectName, PCnumber = 5)

Arguments

ResPCALMEffects	a ResPCALMEffects list from the function PCALMEffects
EffectName	a character with the name of the effect to plot
PCnumber	Integer with the number of components to plot

Value

A ggplot2 object with the Screeplot

Examples

 data('UCH')
 ResLMModelMatrix = LMModelMatrix(formula=as.formula(UCH$formula),design=UCH$design)
 ResLMEffectMatrices = LMEffectMatrices(ResLMModelMatrix,outcomes=UCH$outcomes)
 ResPCALMEffects = PCALMEffects(ResLMEffectMatrices,method="ASCA-E")
 PlotScree(ResPCALMEffects,"Hippurate:Citrate",PCnumber=8)

FranceschiniS/LMWiRe documentation built on Oct. 30, 2019, 6:20 p.m.