get_data_provenance: Find user supplied data provenance information about files in...

In FredHutch/tgR.data: Data Management Support for Fred Hutch Translational Genomics

Find user supplied data provenance information about files in S3

Description

Find user supplied data provenance information about files in S3

Usage

get_data_provenance(
  bucket = NULL,
  prefix = NULL,
  uuid = NULL,
  DAG = NULL,
  allowEmpty = F,
  file_type = NULL
)

Arguments

bucket	Bucket(s) to query
prefix	Bucket prefix(es) to query
uuid	(Optional) uuid(s) to get data provenance for
DAG	(Optional) Data access group to query if you are part of multiple DAGs
allowEmpty	(Optional) Returns even empty columns if set to TRUE - use if you are interested in applying new annotations
file_type	(Optional) Specific file type(s) to query for, such as "bamCramSam", "variants" or "tabularMatrix"

Details

At least one bucket and/or prefix is required.

Value

A data frame containing metadata about files in S3. Requesting data from a specific prefix or other options can speed up the request.

FredHutch/tgR.data documentation built on May 30, 2022, 9:30 a.m.