QMP: Quantitative Microbiome Project data
In FrederickHuangLin/ANCOMBC: Microbiome differential abudance and correlation analyses with bias correction
QMP R Documentation
Quantitative Microbiome Project data
Description
The data containing quantitative microbiome count data of
dimension 106 samples/subjects (in rows) and 91 OTUs (in columns).
The raw dataset is pruned the taxa present less than 30
final dataset contains only healthy subjects from two cohorts:
Study cohort and Disease cohort.
For details, see https://doi.org/10.1038/nature24460.
Usage
data(QMP)
Format
The dataset in matrix format.
Details
The dataset is also available via the SPRING R package
https://github.com/GraceYoon/SPRING in matrix format.
Value
Loads the dataset in R.
Author(s)
Huang Lin huanglinfrederick@gmail.com
References
Vanderputte et al. Nature. 551: 507-511, 2017.
https://doi.org/10.1038/nature24460
FrederickHuangLin/ANCOMBC documentation built on Jan. 4, 2024, 8:18 a.m.
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| QMP | R Documentation |
Quantitative Microbiome Project data
Description
The data containing quantitative microbiome count data of dimension 106 samples/subjects (in rows) and 91 OTUs (in columns). The raw dataset is pruned the taxa present less than 30 final dataset contains only healthy subjects from two cohorts: Study cohort and Disease cohort. For details, see https://doi.org/10.1038/nature24460.
Usage
data(QMP)
Format
The dataset in matrix format.
Details
The dataset is also available via the SPRING R package
https://github.com/GraceYoon/SPRING in matrix format.
Value
Loads the dataset in R.
Author(s)
Huang Lin huanglinfrederick@gmail.com
References
Vanderputte et al. Nature. 551: 507-511, 2017. https://doi.org/10.1038/nature24460
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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