merge_same_tf: Merge overlapping TFBS

Description Usage Arguments Value

View source: R/tfbsDB_parse_and_plot.R

Description

Merge adjacent TFBS that overlap by at least minfrac

Usage

1
merge_same_tf(gr, minfrac = 0.05, fxn = min)

Arguments

gr

GRange object of TFBS

minfrac

minimum overlap between to windows to merge TFBS's

fxn

score of merged interval is the assigned as fxn(score(.)) of overlapping intervals

Value

non-redundant set of intervals as GRanges


GabrielHoffman/tfbsDB documentation built on June 23, 2020, 5:29 a.m.