cran-comments.md

In GabrielNakamura/FishPhyloMaker: Phylogenies for a List of Finned-Ray Fishes

Test environments

• local OS X install, R 4.1.0
• Windows Server 2008 R2 SP1, R-devel, 32/64 bit
• Fedora Linux, R-devel, clang, gfortran
• Ubuntu Linux 20.04.1 LTS, R-release, GCC

R CMD check results

There were no ERRORs or WARNINGs.

NOTES.

• checking CRAN incoming feasibility ... NOTE Maintainer: ‘Gabriel Nakamura [e-mail]’

New submission

MANUAL CHECKING

• Please omit the redundant "An R Package to" from your title.

I removed the redundant part of the title

• Is there a doi available to the reference in your description field you could add in the form ?

I added a doi to the reference

• Please unwrap the examples if they are executable in < 5 sec, or create additionally small toy examples to allow automatic testing. (You could also replace \dontrun{} with \donttest, if it takes longer than 5 sec to be executed, but it would be preferable to have automatic checks for functions. Otherwise, you can also write some tests.)

I remove \dontrun{} and change it to \donttest{} in fishPhyloMaker.R and whichFishAdd.R functions, since the example are executed in > 5 sec. I can not remove \dontrun{} from tab_function.R since it depends on a interactive procedure with the user.

• Possibly mis-spelled words in DESCRIPTION: al (19:91) et (19:88) Phylogenies (3:8) Rabosky (19:80)

The spelling is correct for all words

• Found the following (possibly) invalid URLs: URL: %22http://www.fishbase.org%22 From: inst/doc/FishPhyloMaker_vignette.html Message: Invalid URI scheme

I changed the URL to Fishbase database and now the link is correct with the proper https address

• Found the following (possibly) invalid URLs: URL: https://doi.org/10.1590/1982-0224-2020-0126 From: man/neotropical_comm.Rd Status: Error Message: libcurl error code 60: SSL certificate problem: unable to get local issuer certificate (Status without verification: OK)

The URL is valid

GabrielNakamura/FishPhyloMaker documentation built on Jan. 27, 2024, 11:46 a.m.