API for GiBacci/expR
| Global functions | |
|---|---|
| .PairedSamples | Man page |
| .SingleEndSamples | Man page |
| .evalFunBy | Man page Source code |
| .getExperiment | Man page Source code |
| .getPairedFromFilename | Man page Source code |
| .getSingleEndFromFilename | Man page Source code |
| Experiment | Man page |
| Experiment-class | Man page |
| N | Man page |
| PairedSamples-class | Man page |
| SingleEndSamples-class | Man page |
| Task | Man page |
| Task-class | Man page |
| accessors | Man page |
| as.data.frame.Experiment | Man page Source code |
| as.data.frame.PairedSamples | Man page Source code |
| as.data.frame.SingleEndSamples | Man page Source code |
| as.list.Experiment | Source code |
| byAll | Man page |
| byFct | Man page |
| byFile | Man page |
| byMethods | Man page |
| byRun | Man page |
| bySample | Man page |
| changeExp | Man page |
| clearOutput | Man page |
| cutadapt | Source code |
| expFromFiles | Man page Source code |
| files | Man page |
| formatOutput | Man page Source code |
| formatSample | Man page Source code |
| getExp | Man page |
| getOut | Man page |
| input.exists | Man page |
| newTask | Man page Source code |
| nrun | Man page |
| out2exp | Man page |
| output | Man page |
| output.exists | Man page |
| run | Man page |
| runFromBasedir | Man page Source code |
| runFromHeader | Man page Source code |
| runTask | Man page |
| samples | Man page |
| setOutput | Man page |
| setStep | Man page |
| splitBy | Man page |
| splitByFile | Man page |
| splitByOutput | Man page |
| splitByRun | Man page |
| splitBySample | Man page |
| step | Man page |
| step<- | Man page |
| sysByAll | Man page |
| sysByFct | Man page |
| sysByFile | Man page |
| sysByMethods | Man page |
| sysByRun | Man page |
| sysBySample | Man page |
| task.accessors | Man page |
| toSingleEnd | Man page |
| up2date | Man page |
| validCutadaptObject | Source code |
| validExperimentObject | Man page Source code |
| validPairedSamplesObject | Man page Source code |
| validSingleEndSamplesObject | Man page Source code |
