SingleEndSamples-class: Single end experiment class

In GiBacci/expR:

Single end experiment class

Description

This class represent a standard single-end experiment. In addition to the Experiment class it provides a vector of file paths and a list of output paths. They can both be used in the context of other methods such as by_sample(), for sample wise computation and by_run() for run wise computation.

Details

Instances of this class should be created using the getSingleEndFromFilename() function.

Value

a single end experiment

Slots

files

the paths to sequence files

output

the paths to output file

See Also

getSingleEndFromFilename(), for class creation and by_sample() and by_run() for computation

GiBacci/expR documentation built on Oct. 15, 2022, 12:15 a.m.